Publicações dos últimos 5 anos

2017

Amaro-Filho, SM; Bertoni, N; Brant, AC; Vidal, JPCB; Felix, SP; Cavalcanti, SMB; Carestiato, FN; Martins, LFL; Almeida, LM; Moreira, MAM. 2017. Methylation at 3-LCR of HPV16 can be affected by patient age and disruption of E1 or E2 genes. Virus Research (Print) 232:48-53.

Andrade, AC; Froes, A; L, FAC; Thompson, FL; Kruger, RH; Dinsdale, E & Bruce, T. 2017. Diversity of Microbial Carbohydrate-Active enZYmes (CAZYmes) Associated with Freshwater and Soil Samples from Caatinga Biome. Microbial Ecology.

Andrade, SD; Sabido, M; Monteiro, WM; Benzaken, AS & Tanuri, A. 2017. Drug resistance in antiretroviral-naive children newly diagnosed with HIV-1 in Manaus, Amazonas. Journal of Antimicrobial Chemotherapy (Print).

Carvalho, INSR; Reis, AHO; Santos, ACE & Vargas, FR. 2017. A polymorphism in mir-34b/c as a potential biomarker for early onset of hereditary retinoblastoma. Cancer Biomarkers 9:1-5.

Chimelli, LM; Avvad-Portari, ASO; Wiley, E; Camacho, CA; Lopes, AHS; Machado, VS; Andrade, HN; Dock, CV; Moreira, DCA; Tovar-Moll, ME; Oliveira-Szejnfeld, F; Carvalho, OS; Ugarte, ACG; Batista, ON; Amorim, AGM; Melo, MAMR; Ferreira, FO; Marinho, TA; Azevedo, JRL; Leal, GS; Costa, JIBF; Madeiro, R; Rehen, S; Arruda, MB; Brindeiro, RM, et al. 2017. The spectrum of neuropathological changes associated with congenital Zika virus infection. Acta Neuropathologica 04:1-17.

Coni, EOC; Ferreira, CM; Meirelles, PM; Meezes, R; Santana, EFC; Moreira, APB; Amado-Filho, GM; Ferreira, BP; Pereira-Filho, GH; Thompson, FL; Moura, RL & Francini-Filho, RB. 2017. Modeling abundance, growth, and health of the solitary coral Scolymia wellsi (Mussidae) in turbid SW Atlantic coral reefs. Marine Biology (Berlin) 164:1.

Costa-Paiva, EM; Whelan, NV; Waits, DS; Santos, SR; Schrago, CEG & Halanych, K. 2017. Discovery and evolution of novel hemerythrin genes in annelid worms. BMC Evolutionary Biology (Online) 17:85.

Ferreira, MP; Coghill, AE; Chaves, CB; Bergmann, A; Thuler, LC; Soares, EA; Pfeiffer, RM; Engels, EA & Soares, MA. 2017.Outcomes of cervical cancer among HIV-infected and uninfected women treated at the Brazilian National Institute of Cancer (2001-2013). AIDS (London) 31:1-531.

Galliez, RM; Spitz, M; Piazza Rafful, P; Cagy, M; Escosteguy, C; Brito, CSG; Sasse, E; Goncalves, AL; Silveira, PP; Pezzuto, P; Ornelas, AMM; Tanuri, A; Aguiar, RS & Tovar Moll, F. 2017. Zika Virus causing encephalomyelitis associated with immunoactivation. Open Forum Infectious Diseases.

Garcez, PP; Nascimento, JM; Vasconcelos, JM; Madeiro da Costa, R; Delvecchio, RC; Trindade, P; Loiola, EC; Higa, LM; Cassoli, JS; Vitoria, G; Sequeira, PC; Sochacki, J; Aguiar, RS; Fuzzi, HT; de Filippis, AMB; Vianez Junior, JLSG; Tanuri,A; Souza, DM; Rehen, SK. 2017. Zika virus disrupts molecular fingerprinting of human neurospheres. Scientific Reports 7:40780.

Geddes, VEV; Jose, DP; Leal, FE; Nixon, DF; Tanuri, A & Aguiar, RS. 2017. HTLV-1 Tax activates HIV-1 transcription in latency models. Virology (New York, N.Y. Print) 504:45-51.

Grativol, AD; Marchetti, AA; Wetler-Tonini, RM; Venancio, TM; Gatts, CEN; Thompson, FL & Rezende, CE. 2017. Bacterial interactions and implications for oil biodegradation process in mangrove sediments. Marine Pollution Bulletin 1:1.

Guterres , A; Oliveira, RC; Fernandes, J; Lemos, ERS & Schrago,CEG. 2017. New bunya-like viruses: Highlighting their relations. Infection, Genetics and Evolution (Print) 49:164-173.

Leslie, EJ; Carlson, JC; Shaffer, JR; Butali, A; Buxo, CJ; Castilla, EE; Christensen, K; Deleyiannis, FWB; Leigh Field, L; Hecht, JT; Moreno, L; Orioli, IM; Padilla, C; Vieira, AR; Wehby, GL; Feingold, E; Weinberg, SM; Murray, JC; Beaty, TH & Marazita, ML. 2017. Genome-wide meta-analyses of nonsyndromic orofacial clefts identify novel associations between FOXE1 and all orofacial clefts, and TP63 and cleft lip with or without cleft palate. Human Genetics 1:1.

Mangeon, A; Menezes-Salgueiro, AD & Sachetto-Martins,G. 2017. Start me up: Revision of evidences that AtGRP3 acts as a potential switch for AtWAK1. Plant Signalling & Behavior (Online).

Melo, ASO; Chimelli, L & Tanuri, A. 2017. Congenital Zika Virus Infection. Cadastro do periódico JAMA Neurology.

Moura, SM; Ártico,S; Lima, C; Nardeli, SM; Berbel, A; Oliveira-Neto, OB; Grossi-de-Sá, MF; Ferrándiz, C; Madueño, F & Alves-Ferreira, M. 2017. Functional characterization of AGAMOUS-subfamily members from cotton during reproductive development and in response to plant hormones. Plant Reproduction 29:1.

Nardeli, SM; Matta, BP; Saad, CF; Reinert, F; Peixoto, RS & Alves-Ferreira, M. 2017. Early Heat Shock Protein Response and Selection of Reference Genes in Arabidopsis thaliana Seedlings Subjected to Marine Fuel Contamination. Water, Air and Soil Pollution (Print) 228:101.

Nicacio, KJ; Ioca, LP; Froes, AM; Leomil, L; Appolinario, LR; Thompson, CC; Thompson, FL; Ferreira, AG; Williams, DE; Andersen, RJ; Eustaquio, AS; Berlinck, RGS. 2017. Cultures of the Marine Bacterium Pseudovibrio denitrificans Ab134 Produce Bromotyrosine-Derived Alkaloids Previously Only Isolated from Marine Sponges. Journal of Natural Products (Print) 80:235-240.

Pérez, T; Dáz, MC; Ruiz, C; Cóndor-Luján, B; Klautau, MRL ; Hajdu, E; Lobo-Hajdu, G; Zea, S; Pomponi, SA; Thacker, RW; Carteron, S; Tollu, G; Pouget-Cuvelier, A; Thélamon, P; Marechal, JP; Tomas, OP; Ereskovsky, AV; Vacelet & J; Boury-Esnault, N. 2017. How a collaborative integrated taxonomic effort has trained new spongiologists and improved knowledge of Martinique Island (French Antilles, eastern Caribbean Sea) marine biodiversity. Plos One 12:e0173859.

Puccioni-Sohler, M; Roveroni, N; Rosadas, C; Ferry, F; Peralta, JM & Tanuri, A. 2017. Dengue infection in the nervous system: lessons learned for Zika and Chikungunya. Arquivos de Neuro-Psiquiatria (Online) 75:123-126.

Ramirez, MCA; Williams, DE; Gubiani, JR; Parra, LL; Santos, MFC; Ferreira, DD; Mesquita, JT; Tempone, AG; Ferreira, AG; Padula, V; Hajdu, E; Andersen, RJ & Berlinck, RGS. 2017. Rearranged Terpenoids from the Marine Sponge Darwinella cf. oxeata and Its Predator, the Nudibranch Felimida grahami. Journal of Natural Products (Print) 80:1110-1114.

Ribeiro, FV; Padula, V; Moura, RL; Moraes, FC; Salomon, PS; Gibran, FZ; Motta, FS; Pereira, RC; Amado-Filho, GM; Pereira-Filho,GE. 2017. Massive opisthobranch aggregation in the largest coralline reefs in the South Atlantic Ocean: are mesoherbivores underestimated top-down players? Bulletin of Marine Science 1:1.

Ribeiro, TP; Arraes, FBM; Lourenço-Tessutti, IT; Silva, MS; Lisei-de-Sá, ME; Lucena, WA; Macedo, LLP; Lima, JN; Amorim, RM; Artico, S; Alves-Ferreira, M; Mattar Silva, MC; Grossi-de-Sá, MF. 2017. Transgenic cotton expressing Cry10Aa toxin confers high resistance to the cotton boll weevil. Plant Biotechnology Journal (Print) 15:1.

Rozental, T; Ferreira, MS; Guterres, A; Mares-Guia, MA; Teixeira, BR; Gonçalves, J; Bonvicino, CR; D' Andréa, OS & Lemos, ERS. 2017. Zoonotic pathogens in Atlantic Forest wild rodents in Brazil: Bartonella and Coxiella infections. Acta Tropica 64-73.

Sacramento, CQM; Freitas, GR; Rocha,CS; Hoelz, N; Miranda, LVB; Fintelman-Rodrigues, M; Marttorelli, N; Ferreira, A; Barbosa-Lima, AC; Abrantes,G; Vieira, JL; Bastos, YR; Volotao, MMM; Nunes, E; Tschoeke, EP; Leomil, L; Loiola, L; Trindade, EC; Rehen, P; Bozza, SK; Bozza, FA; Boechat, PT; Thompson, FL; Filippis, AMB; et al. 2017. The clinically approved antiviral drug sofosbuvir inhibits Zika virus replication. Scientific Reports 7:40920.

Seixas, VC; Russo, CAM & Paiva, PC. 2017. Mitochondrial genome of the Christmas tree worm Spirobranchus giganteus (Annelida: Serpulidae) reveals a high substitution rate among annelids. Gene (Amsterdam) 1:1.

Tschoeke, DA; Oliveira, LS; Leomil, L; Tanuri, A & Thompson, FL. 2017. Pregnant women carrying microcephaly foetuses and Zika virus contain potentially pathogenic microbes and parasites in their amniotic fluid. BMC Medical Genomics 10:165.

2016

Amin, AKMR; Gao, F; Al-Saari, N; Meirelles, PM; Yamazaki, Y; Mino, S; Thompson, FL; Sawabe, T & Sawabe, T. 2016. The First Temporal and Spatial Assessment of Vibrio Diversity of the Surrounding Seawater of Coral Reefs in Ishigaki, Japan. Frontiers in Microbiology (Online) 7.

Amorim, DSS; Krell, CMD; Dubois, FT; Nihel, A; Oliveira, SS; Pont, OMP; Song, A; Verdae, H; Fachin, VK; Klassa, DA; Lamas, B; Oliveira, CJE; Carvalho, SS; Mello-Patiu, CJB; Hajdu, EC; Couri, MSS; Capellari, VC; Falaschi, RS; Feitosa, RL; Prendini, RM; Pombal, L; Fernández, JPJR, Rocha, F & et al. 2016. Timeless standards for species delimitation. Zootaxa (Online) 4137:121-128.

Appolinário, LR; Tschoeke, DA; Rua, CPJ; Venas, T; Campeão, ME; Amaral, GRS; Leomil, L; Oliveira, L; Vieira, VV; Otsuki, K; Swings, J; Thompson, FL & Thompson CC. 2016. Description of Endozoicomonas arenosclerae sp. nov. using a genomic taxonomy approach. Antonie van Leeuwenhoek (Gedrukt).

Arruda, MB; Campagnari, F; Almeida, TB; Couto-Fernandez, JC; Tanuri, A & Cardoso CC. 2016. Single Nucleotide Polymorphisms in Cellular Drug Transporters Are Associated with Intolerance to Antiretroviral Therapy in Brazilian HIV-1 Positive Individuals. Plos One 11:e0163170.

Ashton-Prolla, P & Seuánez, HN. 2016. The Brazilian Hereditary Cancer Network: historical aspects and challenges for clinical cancer genetics in the public health care system in Brazil. Genetics and Molecular Biology (online version) 39:163-165.

Ashton-Prolla,P; Ewald, IP; Cossio, S; Palmero, E; Pinheiro, M; Nascimento, IL; Machado, TM; Abe-Sandes, K; Ribeiro, P; Torales, MB; Goricochea, B; Pereira, MLS; Bock, H; Vargas, FR; Moreira, MAM; Peixoto, A & Teixeira, M. 2016. BRCA1 and BRCA2 rearrangements in Brazilian individuals with Hereditary Breast and Ovarian Cancer Syndrome. Genetics and Molecular Biology (online version) 39:223-231.

Barral, MFM; Sousa, AKP; Santos, AFA; Abreu, CM; Tanuri,A & Soares, MA. 2016. Identification of novel resistance-related polymorphisms in HIV-1 subtype C RT connection and RNase H domains from patients under virological failure in Brazil. AIDS Research and Human Retroviruses volume 33.

Bezerra, AMR; Oliveira, JA & Bonvicino, CR. 2016. Clyomys laticeps (Rodentia: Echimyidae). Mammalian Species (Online) 48:83-90.

Bonvicino,CR; Alves, MCV; Bueno, C; Santos, HS & Geise,L. 2016. Genetic Diversity of Alouatta (Primates) from Brazilian Atlantic Forest. Journal of Primatology 4:1.

Buseyne, F; Gessain, A; Soares, MA; Santos, AFA; Materniak-Kornas, M; Lesage, P; Zamborlini, A; Löchelt, M; Qiao, W; Lindermann, D; Wöhrl, B; Stoye, J; Taylor, I & Khan, A. 2016. Eleventh International Foamy Virus Conference-Meeting Report. Viruses 8:318.

Calegário, G; Pollier, J; Arendt, P; Oliveira, LS; Thompson, CC; Soares, AR; Pereira, RC; Goossens, A & Thompson, FL. 2016. Cloning and Functional Characterization of Cycloartenol Synthase from the Red Seaweed Laurencia dendroidea. Plos One 11:e0165954.

Calvet, G; Aguiar, RS; Melo, ASO; Sampaio, SA; Filippis, I; Fabri, A; Araújo, ESM; Sequeira, PC; Mendonça, MCL; Oliveira, L; Tschoeke, DA; Schrago, CEG; Thompson, FL; Brasil, P; Santos, FB; Nogueira, RMR; Tanuri, A & Filippis, AMB. 2016. Detection and sequencing of Zika virus from amniotic fluid of fetuses with microcephaly in Brazil: a case study. Lancet. Infectious Diseases (Print)16:156.

Cárdenas, CA; Newscombe, EM; Hajdu, EC; Gonzalez-Aravena, M & Bell, JJ. 2016. Sponge richness on algae-dominated rocky reefs in the western Antarctic Peninsula and the Magellan Strait. Polar Research 35:30532.

Carvalho, AB; Dupim, EG & Goldstein, GN. 2016. Improved assembly of noisy long reads by -mer validation. Genome Research 26:1710-1720.

Carvalho, INSR; Freitas, RM & Vargas, FR. 2016. Translating microRNAs into biomarkers: What is new for pediatric cancer? Medical Oncology (Northwood) 33:49.

Carvalho, MS; Lopes, DA; Cosme, B & Hajdu, EC. 2016. Seven new species of sponges (Porifera) from deep-sea coral mounds at Campos Basin (SW Atlantic). Helgoland Marine Research (Print) 70:1-33.

Cassol, D; Cruz, FP; Espindola, K; Mangeon, A; Müller, C; Loureiro, ME; Corrêa, RL & Sachetto-Martins, G. 2016. Identification of reference genes for quantitative RT-PCR analysis of microRNAs and mRNAs in castor bean (Ricinus communis L.) under drought stress. Plant Physiology and Biochemistry (Paris) 106:101-107.

Cavalcanti, T; Santos, GG; Hajdu, EC & Pinheiro, U. 2016. A new shallow water species of Artemisina Vosmaer, 1885 (Microcionidae, Demospongiae; Porifera) from Northeastern Brazil. Zootaxa (Online) 4184:386-390.

Christoff, AP; Passaia, G; Salvati, C; Alves-Ferreira, M; Pinheiro-Margis, M & Margis, R. 2016. Rice bifunctional phytocystatin is a dual modulator of legumain and papain-like proteases. Plant Molecular Biology 91:1-15.

Coelho, MG; Ramos, VN; Limongi, JE; Lemos, ERS; Guterres, A; da Costa Neto, SF; Rozental, T; Bonvicino, CR; D´Andrea, PS; Moraes-Filho, J; Labruna, MB & Szabó, MPJ. 2016. Serologic evidence of the exposure of small mammals to spotted-fever Rickettsia and Rickettsia bellii in Minas Gerais, Brazil. Journal of Infection in Developing Countries (Online) 10:275-282.

Coutinho, FH; Dutilh, EB; Thompson, CC & Thompson, FL. 2016. Proposal of fifteen new species of Parasynechococcus based on genomic, physiological and ecological features. Archives of Microbiology.

Coutinho, FH; Tschoeke, DA; Thompson, FL & Thompson, CC. 2016. Comparative genomics of Synechococcus and proposal of the new genus Parasynechococcus. PEERJ 4:e1522.

Cunha, RD; Higa, L; Pezzuto, P; Valadão, ALC; Garcez, P; Monteiro, F; Loiola, E; Dias, A; Silva, F; Aliota, M; Caine, E; Osorio, J; Bello, M; O`Connor, D; Rehen, S; Aguiar, RS; Savarino, A; Campanati, L & Tanuri, A. 2016. Chloroquine, an Endocytosis Blocking Agent, Inhibits Zika Virus Infection in Different Cell Models. Viruses 8: 322.

Damião, PA; Oliveira-Silva, M; Moreira, MAM; Poliakova, N; Lima, MER; Chiovo, J & Nicol, AF. 2016. Human Papillomavirus types distribution among women with cervical preneoplastic, lesions and cancer in Luanda, Angola. Pan African Medical Journal 24:268.

Faria, MB; Siqueira, MLG & Bonvicino, CR. 2016. New record of the rare Atlantic Forest rodent Phyllomys lundi (Mammalia: Rodentia). Zoologia (Curitiba. Online) 33:e20150208.

Fernandes-Cardoso, J; Süffert, TA; Correa, MG; Jobim, LFJ; Jobim, M; Salim, PH; Arruda, MB; Boullosa, LT; Tanuri, A; Porto, LC; Ferreira Jr, OC. 2016. Association between KIR genotypes and HLA-B alleles on viral load in Southern Brazilian individuals infected by HIV-1 subtypes B and C. Human Immunology.

Fernandez, JCC; Cardenas, CA; Bravo, A; Lôbo-Hajdu, G; Willenz, P & Hajdu, EC. 2016. Lissodendoryx (Ectyodoryx) Lundbeck, 1909 (Coelosphaeridae, Poecilosclerida, Demospongiae) from Southern Chile: new species and a discussion of morphologic characters in the subgenus. Zootaxa (Auckland. Print) 4092:69-89.

Ferreira, EM; Vizzoni, VF; Balsemão-Pires, ER; Moerbeck, L; Gazêta, GS; Joseph, P; Voloch, CM & Soares, CAG. 2016. Coxiella symbionts are widespread into hard ticks. Parasitology Research (1987. Print).

Fistarol, GO; Farias, M & Salomon, PS. 2016. Viability of Using Flue Gas as Carbon Source for Microalgae Cultivation. International Journal of Green Technology 2:13-19.

Galliez, RM; Spitz, M; Piazza Rafful, P; Cagy, M; Escosteguy, C; Germano, CSB; Sasse, E; Gonçalves, AL; Silveira, PP; Pezzuto, P; Ornelas, AMM; Tanuri, A; Aguiar, RS & Tovar Moll, F. 2016. Zika Virus causing encephalomyelitis associated with immunoactivation.. Open Forum Infectious Diseases 3:ofw203.

Gao, F; Al-Saari, N; Amin, AKMR; Sato, K; Mino, S; Suda, W; Oshima, K; Hattori, M; Ohkuma, M; Costa, PIH; Meirelles, PM; Thompson, FL; Thompson, CC; Gomez-Gil, B; Sawabe, T & Sawabe, T. 2016. Vibrio ishigakensis sp. nov., in Halioticoli clade isolated from seawater in Okinawa coral reef area, Japan. Systematic and Applied Microbiology (Print).

Garcez, PP; Loiola, EC; Madeiro da Costa, R; Higa, L; Trindade, P; Cunha, RD; Nascimento, JM; Brindeiro, RM; Tanuri, A; Rehen, SK. 2016. Zika virus impairs growth in human neurospheres and brain organoids. Science (New York, N.Y.) 1.

Garcia, GD; Santos, EO; Sousa, GV; Zingali, R; Thompson, CC & Thompson, FL. 2016. Metaproteomics reveals metabolic transitions between healthy and diseased stony coral. Molecular Ecology (Print).

Gonçalves, J; Teixeira, BR; Olifiers, N; Lucio, CS; Riski, LL; Costa-Neto, SF; Lemos, ERS; Bonvicino, CR & D´Andrea, PS. 2016. A survey of small mammals in the Atlantic Forest of the Northewestern Region of Rio de Janeiro state. Oecologia Australis 20:492-500.

González-Aguilera, KL; Saad, CF; Chávez Montes, RA; Alves-Ferreira, M & Folter, S. 2016. Selection of Reference Genes for Quantitative Real-Time RT-PCR Studies in Tomato Fruit of the Genotype MT-Rg1. Frontiers in Plant Science 7:1.

Guimarães-Dias, F; Neves-Borges, AC; Conforte, AJ; Giovanella-Kampmann, L; Ferreira, AVJ; Amorim, RMS; Benevent, MA; Lisei de Sá, ME; Mesquita, RO; Rodrigues, FA; Nepomuceno, AL; Romano, E; Loureiro, ME; Grossi-de-Sá, MF & Alves-Ferreira, M. 2016. Differential Impact of Acclimation and Acute Water Deprivation in the Expression of Key Transcription Factors in Soybean Roots. Plant Molecular Biology Reporter 34:1-14.

Justi, SA; Galvão, C & Schrago, CEG. 2016. Geological Changes of the Americas and their Influence on the Diversification of the Neotropical Kissing Bugs (Hemiptera: Reduviidae: Triatominae). PLoS Neglected Tropical Diseases (Online) 10:e0004527.

Koerich, LB; Dupim, EG; Faria, L; Dias, F; Dias, A; Trindade, G; Mesquita, RD & Carvalho, AB. 2016First report of Y-linked genes in the kissing bug Rhodnius prolixus. BMC Genomics 17:100.

Knowles, BS; Bailey, CB; Barott, BA; Cantu, KVA; Cobián-Güemes, AG; Coutinho, FH; Dinsdale, EA; Felts, B; Furby, KA; George, EE; Green, KT; Gregoracci, GB; Haas, AF; Haggerty, JM; Hester, ER; Hisakawa, N; Kelly, LW; Lim, YW; Little, M; Luque, A; McDole-Somera, T; Mcnair, K; Oliveira, LS; Quistad, SD; Thompson, FL & et al. 2016. Lytic to temperate switching of viral communities. Nature (London).

Leslie, EJC; Liu, HC; Shaffer, JC; Feingold, JR; Wehby, E; Laurie, G; Jain, CA; Laurie, D; Doheny, CC; MacHenry, KF; Resick, T; Sanchez, J; Jacobs, C; Emanuele, JB; Vieira, AR; Neiswanger, KS; Czeizel, J; Deleyiannis, AE; Christensen, F; Munger, K; Lie, RG; Wilcox, RT; Romitti, A; A, P; Orioli,IM; et al. 2016. A Genome-wide Association Study of Nonsyndromic Cleft Palate Identifies an Etiologic Missense Variant in GRHL3. American Journal of Human Genetics 98:744-754.

Leslie, EJC; Shaffer, JC; Feingold, JR; Wehby, E; Laurie, G; Jain, CA; Laurie, D; Doheny, CC; Mahenry, KF; Resick, T; Sanchez, J; Jacobs, C; Emanuele, JB; Vieira, AR; Neiswanger, KS; Lidral, K; Valencia-Ramirez, AC; Lopez-Palacio, LC; Valencia, AM; Arcos-Burgos, DR; Czeizel, M; Field, AE; Padilla, LL; La Paz, CDC; Orioli,IM; et al. 2016. A multi-ethnic genome-wide association study identifies novel loci for non-syndromic cleft lip with or without cleft palate on 2p24.2, 17q23 and 19q13. Human Molecular Genetics (Print) ddw104.

Lima, S; Vasconcelos, AV; Berbel-Filho, WM; Lazoski,C; Russo, CAM; Sazima, I & Solé-Cava, AM. 2016. Effects of Pleistocene climatic and geomorphological changes on the population structure of the restricted-range catfish Trichogenes longipinnis (Siluriformes: Trichomycteridae). Systematics and Biodiversity (Print) 1:1-16.

Lisboa Machado, S; Goncalves, GS; Dudley, D; O'Connor, D; Keiko Toma, H; Couto-Fernandez, JC & Tanuri, A. 2016. Development of a qualitative qPCR test to identify patients failing first time therapy to NNRTI. AIDS Research and Human Retroviruses.

Lopes, FAC; Catão, ECP; Santana, RH; Cabral, AS; Paranhos, R; Rangel, TP; Rezende, CE; Edwards, RA; Thompson, CC; Thompson, FL; Kruger, RH. 2016. Microbial Community Profile and Water Quality in a Protected Area of the Caatinga Biome. Plos One 11:e0148296.

Loss-Oliveira,L; Sakuragui, CM; Soares, ML & Schrago, CG. 2016. Evolution of (Araceae) species in Neotropical biomes. PEERJ 4: e1744.

Machado, CDV; Carvalho, FM; Silva, LCS; Santos, SE; Martins, C; Poletta, FA; Mereb, JC; Vieira, AR; Castilla, EE & Orioli, IM. 2016. Analysis of the genetic ancestry of patients with oral clefts from South American admixed populations. European Journal of Oral Sciences.

Machado, CDV; Tostes, M; Alves, G; Nazer, J; Martinez, L; Wettig, E; Pizarro Rivadeneira, O; Diaz Caamano, M; Larenas Ascui, J; Pavez, P; Dutra, MG; Castilla, EE & Orioli, IM. 2016. Uniparental ancestry markers in Chilean populations. Genetics and Molecular Biology (online version) 1:1.

Mangeon, A; Pardal, R; Menezes-Salgueiro, AD; Duarte, GL; Seixas, R; Cruz, FP; Cardeal, V; Magioli, C; Ricachenevsky, FK; Margis, R & Sachetto-Martins, G. 2016. AtGRP3 Is Implicated in Root Size and Aluminum Response Pathways in Arabidopsis. Plos One 11:e0150583.

Medeiros, SO; Abreu, CM; Cunha, RD; Ribeiro, AP; Vasconcelos, Z; Brindeiro, RM & Tanuri, A. 2016. Follow-up on long-term antiretroviral therapy for cats infected with feline immunodeficiency virus. Journal of Feline Medicine and Surgery 18: 264-272.

Melo, ASO; Aguiar, RS; Amorim, MMR; Arruda, MB; Melo, FOR; Batista, STC; Ferreira, AGM; Santos, T; Sampaio, MP; Moura, VV; Rabello, SOM; Gonzaga, LP; Malinger, CE; Ximenes, G; Oliveira-Szejnfeld, R; Tovar-Moll, OS; Chimelli, FL; Silveira, PP; Cunha, RD; Higa, L; Campanati, LN; Filippis, RMR; Bispo, AM; Szejnfeld, J; et al. 2016. Congenital Zika Virus Infection. Cadastro do periódico JAMA Neurology 73:1234.

Meyrelles, ARI; Siqueira, JD; Santos, PP; Hofer, CB; Luiz, RR; Seuánez, HN; Almeida, G; Soares,MA; Soares, EAJM & Machado, ES. 2016. Bonafide, type-specific human papillomavirus persistence among HIV-positive pregnant women: predictive value for cytological abnormalities, a longitudinal cohort study. Memórias do Instituto Oswaldo Cruz (Online) 111:120-127.

Moerbeck, L; Vizzoni, VF; Ferreira, EM; Cavalcante, RC; Oliveira, SV; Soares, CAG; Amorim, M & Gazêta, GS. 2016. (Rickettsiales: Rickettsiaceae) Vector Biodiversity in High Altitude Atlantic Forest Fragments Within a Semiarid Climate: A New Endemic Area of Spotted-Fever in Brazil. Journal of Medical Entomology.

Mota, LD; Nishiya, AS; Finger-Jardim, F; Barral, MFM; Silva, CM; Nader, MM; Vitola, C; da Hora, VP; Silveira, J; Basso, RP; Soares, MA; Levi, JE & Martínez, AMB. 2016. Prevalence of human pegivirus (HPgV) infection in patients carrying HIV-1C or non-C in southern Brazil. Journal of Medical Virology (Print) 88:e24574.

Motta, IJF; Spencer, BR; Cordeiro da Silva, SG; Arruda, MB; Dobbin, JA; Gonzaga, YBM; Arcuri, IP; Tavares, RCBS; Atta, EH; Fernandes, RFM; Costa, DA; Ribeiro, LJ; Limonte, F; Higa, L; Voloch, CM; Brindeiro, RM; Tanuri, A & Ferreira, OC. 2016. Evidence for Transmission of Zika Virus by Platelet Transfusion. New England Journal of Medicine (Print) 375:1101-1103.

Moura, RL; Amado-Filho, GM; Moraes, FC; Brasileiro, PS; Salomon, PS; Mahiques, MM; Bastos, ACA; Silva, MG; Araujo, JM; Brito, BF; Rangel, FP; Oliveira, TP; Bahia, BCV; Paranhos, RG; Dias, RP; Siegle, RJS; Figueiredo, E; Pereira, AG; Leal, RC; Hajdu, CV, Asp, E; Gregoracci, NE; Neumann-Leitão, GB; Yager, S; et al. 2016. An extensive reef system at the Amazon River mouth. Science Advances 2:e1501252.

Nardeli, SM; Saad Rodrigues, CF; Rosseto, PB; Caetano, VS; Ribeiro-Alves, M; Paes, JES; Danielowski, R; Maia, LC; Oliveira, AC; Peixoto, RS; Reinert, F & Alves-Ferreira, M. 2016. Transcriptional responses of Arabidopsis thaliana to oil contamination. Environmental and Experimental Botany 127:1.

Nardy, AFFR; Freire-de-Lima, L; Freire-de-Lima, CG & Morrot, A. 2016. The Sweet Side of Immune Evasion: Role of Glycans in the Mechanisms of Cancer Progression. Frontiers in Oncology 6:09.

Nascimento, FF; Oliveira-Silva,M; Veron, G; Salazar-Bravo, J; Gonçalves, PR; Langguth, A; Silva, CR & Bonvicino, CR. 2016. The Evolutionary History and Genetic Diversity of Kinkajous, Potos flavus (Carnivora, Procyonidae). Journal of Mammalian Eolution 2016:1.

Nobres, P; Patreze, CM; Waltenberg, FP; Correa, MF; Tavano, ECR; Mendes, BMJ; Alves-Ferreira, M. 2016. Characterization of the Promoter of the Homeobox Gene CaHB12 in Coffea arabica. Tropical Plant Biology (Print) 9:1.

O´Connor, DH; Osorio, JE; Tanuri, A & Kallas, EG. 2016. Forging Collaborative Relationships in Brazil: From AIDS to ZIKV. Cell (Cambridge) 166: 2-4.

Oliveira, NS; Vianna-Andrade, C; Grinsztejn, B; Friedman, RK; Bastos, CC; Veloso, VG; Coutinho, JR; Chicarino-Oliveira, JM; Ferreira, DC; Pereira, LOR; Amaro-Filho, SM; Moreira, MAM; Nuovo, GJ & Nicol, AF. 2016. In situ FoxP3+ and IL-10 over-expression is associated with high grade anal lesions in HIV infected patients. International Journal of Clinical and Experimental Pathology 9:IJCEP0019868.

Oliveira-Szejnfeld, PS; Levine, D; Melo, ASO; Amorim, MMR; Batista, AGM; Chimelli, L; Tanuri, A; Aguiar, RS; Malinger, G; Ximenes, R; Robertson, R; Szejnfeld, J & Tovar-Moll, F. 2016. Congenital Brain Abnormalities and Zika Virus: What the Radiologist Can Expect to See Prenatally and Postnatally. Radiology 280:161584.

Ornelas, AMM; Pezzuto, P; Silveira, PP; Melo, FO; Ferreira, TA; Oliveira-Szejnfeld, PS; Leal, JI; Amorim, MMR; Hamilton, S; Rawlinson, WD; Cardoso, CC; Nixon, DF; Tanuri, A; Melo, AS & Aguiar, RS. 2016. Immune activation in amniotic fluid from zika virus associated microcephaly. Annals of Neurology 81:152-156.

Pessoa, LS; Vidal, LEL; Costa, ECB; Abreu, CM; Cunha, RD; Valadão, ALC; Santos, AFA & Tanuri, A. 2016. Development of a rapid phenotypic test for HCV protease inhibitors with potential use in clinical decisions. Genetics and Molecular Biology (online version) 39:358-364.

Puccioni-Sohler, M; Salgado, MCF; Versiani, I; Rosadas, C; Ferry, F; Tanuri, A; Ferreira Jr., OC. 2016. Carpal tunnel syndrome after chikungunya infection. International Journal of Infectious Diseases 53:21-22.

Raposo, LM ; Arruda, MB; Brindeiro, RM & Nobre, FF. 2016. Lopinavir Resistance Classification with Imbalanced Data Using Probabilistic Neural Networks. Journal of Medical Systems 40:69.

Reinert, F; Pinho, CF & Alves-Ferreira, M. 2016. Diagnosing the level of stress on a mangrove species (Laguncularia racemosa) contaminated with oil: A necessary step for monitoring mangrove ecosystems. Marine Pollution Bulletin.108:1.

Reis, AHO; Vargas, FR & Lemos, B. 2016. Biomarkers of genome instability and cancer epigenetics. Tumor Biology 10:13029-13038.

Reis, VM; Karez, CS; Mariath, R; Moraes, FC; Carvalho, RT; Brasileiro, PS; Bahia, RG; Lotufo, TMC; Ramalho, LV; Moura, RL; Francini-Filho, RB; Pereira-Filho, GH; Thompson, FL; Bastos, AC; Salgado, LT & Amado-Filho, GM. Carbonate Production by Benthic Communities on Shallow Coralgal Reefs of Abrolhos Bank, Brazil. Plos One 11: e0154417.

Russo, CAM; Aguiar, B; Voloch, CM & Selvatti, AP. 2016. When Chinese Masks Meet Phylogenetics. The American Biology Teacher 78:241-247.

Santos, ACE; Heck, B; Camargo, B & Vargas, FR. 2016. Prevalence of Café-au-Lait Spots in children with solid tumors. Genetics and Molecular Biology (online version) 39:232-238.

Santos, AFA; Bello, G; Vidal, LEL; Souza, SL; Mir, D & Soares, MA. 2016. In-depth phylogenetic analysis of hepatitis C virus subtype 1a and occurrence of 80K and associated polymorphisms in the NS3 protease. Scientific Reports 6:31780.

Santos, GJG; Pinheiro, US; Hajdu, EC & Van Soest, RWM. 2016. New Genus and species of Heteroxyidae from Brazil (Axinellida: Demospongiae: Porifera), with a revised identification key for the family. Zootaxa (Online) 4158:105-116.

Schtscherbyna, A; Gouveia, C; Pinheiro, MFMC; Raggio, LR; Farias, MLF & Machado, ES. 2016. Vitamin D status in a Brazilian cohort of adolescents and young adults with perinatally acquired human immunodeficiency virus infection. Memórias do Instituto Oswaldo Cruz (Online)111:128-133.

Seixas, VC; Paiva, PC & Russo, CAM. 2016. Complete mitochondrial genomes are not necessarily more informative than individual mitochondrial genes to recover a well-established annelid phylogeny. Gene Reports 5:10-17.

Selvatti, AP; Galvão, A; Pereira, AG; Gonzaga, LP & Russo, CAM. 2016. An African origin of the Eurylaimides (Passeriformes) and the successful diversification of the ground-foraging pittas (Pittidae). Molecular Biology and Evolution 1:msw250.

Silva, AB; Duarte, MM; Vizzoni, VF; Dure, AIL; Lopez, DM; Nogueira, RMS; Soares, CAG; Ferreira, EM & Gazeta, GS. 2016. Comparative growth of spotted fever group Rickettsia spp. strains in Vero cells. Memórias do Instituto Oswaldo Cruz (Online) 111:528-531.

Siqueira, JD; Alves, BM; Prellwitz, IM; Furtado, C; Meyrelles, AR; Machado, ES; Seuánez, HN; Soares, MA & Soares, EAJM. 2016. Identification of novel human papillomavirus lineages and sublineages in HIV/HPV-coinfected pregnant women by next-generation sequencing. Virology (New York, N.Y. Print) 493:202-208.

Soares-Gomes, A; Gama, BAP; Baptista Neto, JA; Freire, DG; Cordeiro, RC; Machado, W; Bernardes, MC; Coutinho, R; Thompson, FL & Pereira, RC. 2016. An environmental overview of Guanabara Bay, Rio de Janeiro. Regional Studies in Marine Science 1:1.

Steinum, TM; Karatá, S; Martinussen, NT; Meirelles, PM; Thompson, FL & Colquhoun, DJ. 2016. Multi-Locus Sequence Analysis of the close relatives and. Applied and Environmental Microbiology (Print).

Szokoli, F; Sabaneyeva, E; Castelli, M; Krenek, S; Scharallhammer, M; Soares, CAG; Silva-Neto, ID; Berendonk, TU & Petroni, G. 2016. 'Candidatus Fokinia solitaria', a Novel 'Stand-Alone' Symbiotic Lineage of Midichloriaceae (Rickettsiales). Plos One 11:e0145743.

Tavares, WC; Pessôa, LM & Seuánez, HN. 2016. Stability and acceleration of phenotypic evolution in spiny rats ( , Echimyidae) across different environments. Zoological Journal of the Linnean Society 178.

Tavares, WC; Pessôa, LM & Seuánez, HN. 2016. Phylogenetic and size constrains on cranial ontogenetic allometry of spiny rats (Echimyidae, Rodentia). Journal of Evolutionary Biology 29:1752-1765.

Teixeira, LO; Vieira, VC; Germano.FN; Gonçalves, CV; Soares, MA & Martínez,AMB. 2016. Prevalência dos tipos de Papilomavírus Humano em mulheres atendidas em um Hospital Universitário no Sul do Brasil. Medicina (Ribeirao Preto. Online) 49:116-123.

Valadão, ALC; Aguiar, RS & Arruda, LB. 2016. Interplay between Inflammation and Cellular Stress Triggered by Flaviviridae Viruses. Frontiers in Microbiology (Online) 7:1233.

Vargas, JE; Chicaybam, L; Stein, RT; Tanuri, A; Delgado-Cañedo, A; Bonamino, MH. 2016. Retroviral vectors and transposons for stable gene therapy: advances, current challenges and perspectives. Journal of Translational Medicine 14: 288.

Vidal, JPCB; Felix, SP; Chaves, CBP; Patury, P; Franco, VF; Morais, EA; Carvalho, NA; Carvalho, ACL; Almeida Neto, OF; Vieira, LMTM; Correa, FM; Martins, LFL; Negrão, A; Almeida, LM & Moreira, MAM. 2016. Genetic diversity of HPV16 and HPV18 in Brazilian patients with invasive cervical cancer. Journal of Medical Virology (Print) 88:1279-1287.

Vidal, LEL; Soares, MA & Santos, AF. 2016. NS3 protease polymorphisms and genetic barrier to drug resistance of distinct hepatitis C virus genotypes from worldwide treatment-naïve subjects. Journal of Viral Hepatitis (Print) volume 23.

Walter, JM; Tschoeke, DA; Meirelles, PM; Oliveira, L; Leomil, L; Tenório, M; Valle, R; Salomon, PS; Thompson, CC & Thompson, FL. 2016. Taxonomic and Functional Metagenomic Signature of Turfs in the Abrolhos Reef System (Brazil). Plos One 11:e0161168.

Wilwerth, MW; Rossetto, PB; Reinert, F; Peixoto, RS; Alves-Ferreira, M. 2016. Efficient RNA extraction protocol for the wood mangrove species laguncularia racemosa suited for next-generation RNA sequencing. Pakistan Journal of Botany 48:661-672.

Yamazaki, Y; Meirelles, PM; Thompson, FL; Sawabe, T & Sawabe, T. 2016. Individual Apostichopus japonicus fecal microbiome reveals a link with polyhydroxybutyrate producers in host growth gaps. Scientific Reports 6: 21631

Zapata, G; Sellanes, J; Thiel, M; Henriquez, C; Hernandez, S; Fernandez, JCC & Hajdu, EC. 2016. Community structure and trophic ecology of megabenthic fauna from the deep basins in the Interior Sea of Chiloé, Chile (41-43° S). Continental Shelf Research 130:47-67.

2015

Aguirre-Santoro, J; Bentacur, J; Brown, GK; Evans, TM; Salgueiro, F; Alves-Ferreira, M & Wendt, T. 2015. Is Ronnbergia (Bromeliaceae, Bromelioideae) a geographically disjunct genus? Evidence from morphology and chloroplast DNA sequence data. Phytotaxa (Online) 219:261.

Al-Saari, N; Gao, F; Rohul, AAKM; Sato, K; Sato, K; Mino, S; Suda, W; Oshima, K; Hattori, M; Ohkuma, M; Meirelles, PM; Thompson, FL; Thompson, CC; Amado-Filho, GM; Gomez-Gil, B; Sawabe, T & Sawabe, T. 2015. Advanced Microbial Taxonomy Combined with Genome-Based-Approaches Reveals that Vibrio astriarenae sp. nov., an Agarolytic Marine Bacterium, Forms a New Clade in Vibrionaceae. Plos One 10:e0136279.

Alvarado-Arnez, LE; Amaral, EP; Sales-Marques, C; Durães, SMB; Cardoso, CC; Sarno, EN; Pacheco, AG; Lana, FCF & Moraes, MO. 2015. Association of IL10 Polymorphisms and Leprosy: A Meta-Analysis. Plos One 10: e0136282.

Alves Jr., N; Meirelles, PM; Santos, EO; Dutilh, BE; Silva, GGZ; Paranhos, R; Rezende, CE; Iida, T; Moura, RL; Krüger, RH; Sawabe, T; Thompson, CC & Thompson, FL. 2015. Microbial community diversity and physical-chemical features of the Southwestern Atlantic Ocean. Archives of Microbiology 197:165-179.

Alves, BM; Prellwitz, IM; Siqueira, JD; Meyrelles, AR; Bergmann, A; Seuánez, HN; Machado, ES; Soares, MA & Soares, EAJM. 2015. The effect of human leukocyte antigen G alleles on human papillomavirus infection and persistence in a cohort of HIV-positive pregnant women from Brazil. Infection, Genetics and Evolution (Print) 34:339-343.

Amaral, GRS; Campeão, ME; Swings, J; Thompson, FL & Thompson, CC. 2015. Finding diagnostic phenotypic features of Photobacterium in the genome sequences. Antonie Van Leeuwenhoek (Dordrecht. Online).

Anjomshoaa, IBR; Deeley, J; Poletta, K; Mereb, FA; Leite, JC; Barreta, AL; Silva, PATM; Dizak, TL; Ruff, P; Patir, T; Koruyucu, A; Abbasolu, M; Casado, Z; Brown, PL; Zaky, A; Bayram, SH; Küchler, EC; Cooper, ME; Kai, L; Marazita, ML; Lknur, TA; Granjeiro, JM; Seymen, F; Castlla, EE; Orioli, IM & et al. 2015. Aquaporin 5 Interacts with Fluoride and Possibly Protects against Caries. Plos One 10:e0143068.

Azevedo, FC; Condor, B; Willenz, P; Hooker, Y; Hajdu, EC & Klautau, MRL. 2015. Integrative taxonomy of calcareous sponges (subclass Calcinea) from the Peruvian coast: morphology, molecules, and biogeography. Zoological Journal of the Linnean Society 173:787-817.

Bernstein, A; Mangeon, A; Almeida-Engler, J; Engler, G; Montagu, MV; Oliveira, DE & Sachetto-Martins, G. 2015. Functional analysis of an auxin-inducible DNA-binding protein gene. Plant Signalling & Behavior (Online) 10:e977706-00.

Bila, DCA; Boullosa, LT; Vubil, AS; Mabunda, NJ; Abreu, CM; Ismael, N; Jani, IV & Tanuri, A. 2015. Trends in Prevalence of HIV-1 Drug Resistance in a Public Clinic in Maputo, Mozambique. Plos One 10:e0130580.

Bitner-Mathé, BC & David, JR. 2015. Genetic variability and phenotypic plasticity of metric thoracic traits in an invasive drosophilid in America. Genetica ('s-Gravenhage).

Bonvicino, CR; Menezes, AREAN; Lazar, A; Penna-Firma, V; Bueno, C; Viana, MC; D´Andrea, PS & Langguth,A. 2015. Chromosomes and phylogeography of Sylvilagus (Mammalia, Leporidae) from eastern Brazil. Oecologia Australis 19:158-172.

Bonvicino, CR; Oliveira, JA; Cordeiro-Estrela, P; D´Andrea, PS & Almeida, AMP. 2015. A Taxonomic Update of Small Mammal Plague Reservoirs in South America. Vector Borne and Zoonotic Diseases (Larchmont, N.Y.) 15:571-579.

Bruce, T; Leite, FG; Miranda, M; Thompson, CC; Pereira, N; Faber, M & Thompson, FL. 2015. Insights from genome of Clostridium butyricum INCQS635 reveal mechanisms to convert complex sugars for biofuel production. Archives of Microbiology 1:1.

Byrareddy, SN; Sidell, N; Arthos, J; Cicala, C; Zhao, C; Little, DM; Dunbar, P; Yang, GX; Pierzchalski, K; Kane, MA; Mayne, AE; Song, B; Soares, MA; Villinger, F; Fauci, AS & Ansari, AA. 2015. Species-Specific Differences in the Expression and Regulation of 4 7 Integrin in Various Nonhuman Primates. The Journal of Immunology (1950) 194:1402866.

Cardoso, LCA; Rodriguez-Laguna, L; Del Carmen Crespo, M; Vallespín, E; Palomares-Bralo, M; Martin-Arenas, R; Rueda-Arenas, I; Silvestre de Faria, PA; García-Miguel, P; Lapunzina, P; Vargas, FR; Seuánez, HN & Martínez-Glez, V. 2015. Array CGH Analysis of Paired Blood and Tumor Samples from Patients with Sporadic Wilms Tumor. Plos One 10:e0136812.

Carvalho, AB; Viçoso, B; Russo, CAM; Swenor, B & Clark, AG. 2015. Birth of a new gene on the Y chromosome of Drosophila melanogaster. Proceedings of the National Academy of Sciences of the United States of America.

Cascardo, RS; Arantes, ILG; Silva, TF; Sachetto-Martins, G; Vaslin, MFS & Corrêa, RL. 2015. Function and diversity of P0 proteins among cotton leafroll dwarf virus isolates. Virology Journal 12:123-133.

Castello-Branco, C; Hestetun, JT; Rapp, HT & Hajdu, EC. 2015. Taxonomy of Cladorhiza in the deep SW Atlantic: C. nicoleae sp. nov. and redescription of C. inversa (Cladorhizidae, Poecilosclerida, Demospongiae). Journal of the Marine Biological Association of the United Kingdom (Print) 96:1-7.

Chimetto, L; Silva, BSO; Moreira, APB; Valle, C; Alves Jr., N; Cavalcanti, G; Garcia, GD; Lopes, RM; Francini-Filho, RB; Moura, RL; Thompson, CC & Thompson, FL. 2015. Diversity and ecological structure of vibrios in benthic and pelagic habitats along a latitudinal gradient in the Southwest Atlantic Ocean. PeerJ 3: e741.

Consortium, RG & Carvalho, AB. 2015. Genome of Rhodnius prolixus, an insect vector of Chagas disease, reveals unique adaptations to hematophagy and parasite infection. Proceedings of the National Academy of Sciences of the United States of America 14936-14941.

Costa, AESF; Neumann-Leitão, S; Thompson, FL; Melo, PAMC & Santana, JR. 2015. Community structure of the Tintinnids (Ciliophora: Spirotrichea) in the region of Abrolhos (Bahia, Brazil). Brazilian Journal of Oceanography (Online) 63:51-61.

Costa, PS; Tschoeke, DA; Silva, BO; Thompson, FL; Reis, MP; Chartone-Souza, E & Nascimento, AMA. 2015. Draft Genome Sequence of Micrococcus sp. Strain MS-AsIII-49, an Arsenate-Reducing Isolate from Tropical Metal-Rich Sediment. Genome Announcements 3:e00122-15.

Coutinho, FH; Meirelles, PM; Moreira, APB; Paranhos, RP; Dutilh, BE & Thompson, FL. 2015. Niche distribution and influence of environmental parameters in marine microbial communities: a systematic review. PeerJ 3:e1008.

Favacho, ARM; Andrade, MN; Oliveira, RC; Bonvicino, CR; D'Andrea, PS & Lemos, ERS. 2015. Zoonotic Bartonella species in wild rodents in the state of Mato Grosso do Sul, Brazil. Microbes and Infection 17:889-892.

Fernandes, J; Oliveira, RC; Guterres, A; Serra, FC; Bonvicino, CR; D´Andrea, PS; Cunha, RV; Levis, S & Lemos, ERS. 2015. Co-circulation of Clade C New World Arenaviruses: New geographic distribution and host species. Infection, Genetics and Evolution (Print) 33:242-245.

Fernandes, NM; Dias, RJP; Schrago, CEG & Silva-Neto, ID. 2015. Redescription and Phylogenetic Position of Spiegel, 1926 (Ciliophora, Heterotrichea) from Guanabara Bay, Brazil. The Journal of Eukaryotic Microbiology.

Fernandes, NM; Paiva, TS; Silva-Neto, ID; Schlegel, M & Schrago, CEG. 2015. Expanded phylogenetic analyses of the class Heterotrichea (Ciliophora, Postciliodesmatophora) using five molecular markers and morphological data. Molecular Phylogenetics and Evolution (Print) 1-18.

Ferreira, EM; Balsemão-Pires, ER; Dietrich, G; Hojgaard, A; Vizzoni, VF; Scoles, G; Bell-Sakyi, L; Joseph, P; Zeidner, NS & Soares, CAG. 2015. Transgene expression in tick cells using Agrobacterium tumefaciens. Experimental & Applied Acarology.

Ferreira, EM; Vizzoni, VF; Piesman, J; Gazeta, GS & Soares, CAG. 2015. Bacteria associated with Amblyomma cajennense tick eggs. Genetics and Molecular Biology (online version).

Fistarol, GO; Coutinho, FH; Moreira, APB; Venas, T; Cánovas, A; Paula, SEM; Coutinho, R; Moura, RL; Valentin, JL; Tenembaum, DR; Paranhos, R; Valle, RAB; Vicente, ACP; Amado-filho, GM; Pereira, RC; Krüger, RH; Rezende, CE; Thompson, CC; Salomon, PS & Thompson, FL. 2015. Environmental and Sanitary Conditions of Guanabara Bay, Rio de Janeiro. Frontiers in Microbiology (Online) 6:1.

Fistarol, GO; Rosato, M; Thompson, FL; Valle, RAB; Reina, GGB & Salomon, PS. 2015. Use of a Marine Microbial Community as Inoculum for Biomethane Production. Environmental Technology 1:1-26.

Fonseca, RF; Carvalho, FM; Poletta, FA; Montaner, D; Dopazo, J; Mereb, JC ; Moreira, MAM; Seuánez, HN; Vieira, AR; Castilla, EE & Orioli, IM. 2015. Family-based genome-wide association study in Patagonia confirms the association of the DMD locus and cleft lip and palate. European Journal of Oral Sciences 123:381-384.

Frazão, A; Silva, HR & Russo, CAM. 2015. The Gondwana Breakup and the History of the Atlantic and Indian Oceans Unveils Two New Clades for Early Neobatrachian Diversification. Plos One 10:e0143926.

Freitas, LA; Russo, CAM ; Voloch, CM; Mutaquiha, OCF; Marques, LP & Schrago, CEG. 2015. Diversification of the genus Anopheles and a Neotropical clade from the Late Cretaceous. Plos One 10:e0134462.

Ghisolfi, RD; Silva, MP; Santos, FT; Servino, RN; Cirano, M & Thompson, FL. 2015. Physical Forcing Mechanisms Controlling the Variability of Chlorophyll-a over the Royal-Charlotte and Abrolhos Banks-Eastern Brazilian Shelf. Plos One 10: e0117082.

Gregoracci, GB; Soares, ACS; Miranda, MD; Coutinho, R & Thompson, FL. 2015. Insights into the Microbial and Viral Dynamics of a Coastal Downwelling-Upwelling Transition. Plos One 10:e0137090.

Guterres, A; Oliveira, RC; Fernandes, J; Schrago, CEG & Lemos, ERS. 2015. Detection of different South American Hantaviruses. Virus Research (Print) 210:1-5.

Hait, SH; Soares, EAJM; Sprinz, E; Arthos, J; Machado, ES & Soares, MA. 2015. Worldwide Genetic Features of HIV-1 Env a4ß7 Binding Motif. Journal of Acquired Immune Deficiency Syndromes (1999) 70:463-471.

Hajdu, EC; Hooker, Y & Willenz, P . 2015. New Hamacantha from Peru and resurrection of Zygherpe as subgenus (Demospongiae, Poecilosclerida, Hamacanthidae). Zootaxa (Auckland. Print) 3926:87-099.

Hoskins, RA; Carlson, JW; Wan, KH; Carvalho, AB; Dimitri, P; Rubin, GM; Karpen, GH & Celniker, S. 2015. The Release 6 reference sequence of the genome. Genome Research 25:445-458.

Krsticevic, FJ; Schrago, CEG & Carvalho, AB. 2015. Long-Read Single Molecule Sequencing to Resolve Tandem Gene Copies: The Mst77Y Region on the Drosophila melanogaster Y Chromosome. G3: Genes, Genomes, Genetics (Bethesda) 5:1145-1150.

Kulcheski, FR; Corrêa, RL; Arantes, I; Lima, JC & Margis, R. 2015. NPK macronutrients and microRNA homeostasis. Frontiers in Plant Science 6:451.

Lambret-Frotté, J; Almeida, LCS; Moura, SM; Souza, FLF; Linhares, FS & Alves-Ferreira, M. 2015. Validating Internal Control Genes for the Accurate Normalization of qPCR Expression Analysis of the Novel Model Plant Setaria viridis. Plos One 10:e0135006.

Lambret-Frotté, J; Ártico,S; Nardeli, SM; Fonseca, FCA; Oliveira-Neto, OB; Grossi-de-Sá, MF & Alves-Ferreira, M. 2015. Promoter isolation and characterization of GhAO-like1, a Gossypium hirsutum gene similar to multicopper oxidases that is highly expressed in reproductive organs. Genome (Ottawa. Print) 58:0055.

Leite, DMB; Fonseca, CA; Leal, CV & Hajdu, EC. 2015. Two new species of Timea from the Southwest Atlantic (Timeidae, Demospongiae, Porifera). Zootaxa (Online) 4034:161-181.

Limongi, JE; Oliveira, RC; Guterres, A; Costa Neto, SF; Fernandes, J; Vicente, LHB; Coelho, MG; Ramos, VN; Ferreira, MS; Bonvicino, CR; D´Andrea, PS & Lemos, ERS. 2015. Hantavirus pulmonary syndrome and rodent reservoirs in the savanna-like biome of Brazil's southeastern region. Epidemiology and Infection (Online) 2015:1-10.

Loh, R; Scarano, FR; Alves-Ferreira, M & Salgueiro, F. 2015. Clonality strongly affects the spatial genetic structure of the nurse species Aechmea nudicaulis (L.) Griseb. (Bromeliaceae). Botanical Journal of the Linnean Society (Print) 178.

Lopes, CAF; Soares, MA; Falci, DR & Sprinz, E. 2015. The Evolving Genotypic Profile of HIV-1 Mutations Related to Antiretroviral Treatment in the North Region of Brazil. Biomed Res Int 2015:1-6.

Marinho, ASN; Lima, MAFD & Vargas, FR. 2015. Analysis of pre-test interviews in a cohort of Brazilian patients with movement disorders. Journal of Community Genetics 9:9.

Mata, H; Gongora, J ; Eizirik, E; Alves, BM; Soares, MA & Ravazzolo, AP. 2015. Identification and characterization of diverse groups of endogenous retroviruses in felids. Retrovirology (London) 12:26.

Medeiros, SO; Abreu, CM; Delvecchio, R; Ribeiro, AP; Vasconcelos, Z; Brindeiro, RM & Tanuri, A. 2015. Follow-up on long-term antiretroviral therapy for cats infected with feline immunodeficiency virus. Journal of Feline Medicine and Surgery.

Meirelles, PM; Amado-Filho, GL; Pereira-Filho, GH; Pinheiro, HT; Moura, RL: Joyeux, JC; Mazzei, EF; Bastos, AC; Edwards, RA; Dinsdale, E; Paranhos, R; Santos, EO; Tetsuya, I; Gotoh, K; Nakamura, S; Sawabe, T; Rezende,CE; Gadelha, LMR; Francini-Filho, RB; Thompson, CC & Thompson, FL. 2015. Baseline Assessment of Mesophotic Reefs of the Vitória-Trindade Seamount Chain Based on Water Quality, Microbial Diversity, Benthic Cover and Fish Biomass Data. Plos One 10:e0130084.

Meirelles, PM; Gadelha, LMR; Francini-Filho, RB; Moura, RL; Amado-Filho, GM; Bastos, AC; Paranhos, RPR; Rezende, CE; Swings, J; Siegle, E; Asp Neto, NE; Neumann Leitão, S; Coutinho, R; Mattoso, M; Salomon, PS; Valle, RAB; Pereira, RC; Krüger, RH; Thompson, CC & Thompson, FL. 2015. BaMBa: towards the integrated management of Brazilian marine environmental data. Database-Oxford 2015:bav088.

Mishra, M; Varghese, RK; Verma, A; Das, S; Aguiar, RS; Tanuri, A; Mahadevan, A; Shankar, SK; Satishchandra, P & Ranga, U. 2015. Genetic diversity and proviral DNA load in different neural compartments of HIV-1 subtype C infection. Journal of Neurovirology 56:36-40.

Montalvão-de-Azevedo, R; Vasconcelos, GM; Vargas, FR; Thuler, LC; Pombo-de-Oliveira, MS & Camargo, B. 2015. RFC-1 80G>A Polymorphism in Case-Mother/Control-Mother Dyads Is Associated with Risk of Nephroblastoma and Neuroblastoma. Genetic Testing and Molecular Biomarkers (Print) 19:75-81.

Moreira, APB; Meirelles, PM; Santos, EO; Amado-Filho, GM; Francini-Filho, RB; Thompson, CC & Thompson, FL. 2015. Turbulence-driven shifts in holobionts and planktonic microbial assemblages in St. Peter and St. Paul Archipelago, Mid-Atlantic Ridge, Brazil. Frontiers in Microbiology (Online) 6:1.

Moreira, JC; Cunha, ABA; Moreira, MAM; Oliveira, JA; Bonvicino, CR & Cerqueira, R. 2015. Isolation of polymorphic microsatellite loci in Akodon cursor (Cricetidae, Sigmodontinae) and cross-amplification in other akodontine rodents. Boletim da Sociedade Brasileira de Mastozoologia 71:33-36.

Muniz, CP; Jia, H; Shankar, A; Troncoso, LL; Augusto, AM; Farias, E; Pissinatti, A; Fedullo, LP; Santos, AFA; Soares, MA & Switzer, WM. 2015. An expanded search for simian foamy viruses (SFV) in Brazilian New World primates identifies novel SFV lineages and host age-related infections. Retrovirology (London) 12:94-99.

Nascimento, FF; Lazar, A; Seuánez, HN & Bonvicino, CR. 2015. Reanalysis of the biogeographical hypothesis of range expansion between robust and gracile capuchin monkeys. Journal of Biogeography (Print) 42:1349-1357.

Nunes, EC; Vizzoni, VF; Navarro, DL; Iani, FCM; Duraes, LS; Daemon, E; Soares, CAG & Gazeta, GS. 2015. Rickettsia amblyommii infecting Amblyomma sculptum in endemic spotted fever area from southeastern Brazil. Memórias do Instituto Oswaldo Cruz (Online) 110:1058-1061.

Nunes, ML; Oliveira, SV; Elkhoury, MR; Fonseca, LX; Pereira, SVC; Caldas, EP; Guimarães, JCN; Rosa, EST; Bonvicino, CR & D´Andrea, PS. 2015. Evidência de circulação de hantavirus em área silenciosa da Região Amazônica. Revista Pan-Amazônica de Saúde (Online) 6:63-67.

Oliveira, L; Tschoeke, D; Oliveira, A; Hill, L; Paradas, W; Salgado, L; Thompson, CC; Pereira, RC & Thompson, FL. 2015. New Insights on the Terpenome of the Red Seaweed Laurencia dendroidea (Florideophyceae, Rhodophyta). Marine Drugs 13:879-902.

Pereira, FS; Monte, TL; Locks-Coelho, LD; Silva, ASP; Barsottini, O; Pedroso, JL; Cornejo-Olivas, M; Mazzetti, P; Godeiro, C; Vargas, FR; Lima, MAFD; Vander Linden, H; Toralles, MBP; Medeiros, PFV; Ribeiro, E; Braga-Neto, P; Salarini, D; Castilhos, RM; Saraiva-Pereira, ML & Jardim, LB. 2015. ATXN3, ATXN7, CACNA1A, and RAI1 Genes and Mitochondrial Polymorphism A10398G Did Not Modify Age at Onset in Spinocerebellar Ataxia Type 2 Patients from South America. The Cerebellum 9:9.

Pinheiro, US; Calheiros, L & Hajdu, EC. 2015. A new species of freshwater sponge, Heteromeyenia barlettai sp. nov. from an aquarium in São Paulo, Brazil (Spongillida: Spongillidae). Zootaxa (Online) 4034:351.

Rhee, SY; Blanco, JL; Jordan, MR; Taylor, J; Lemey, P; Varghese, V; Hamers, RL; Bertagnolio, S; Wit, TFR; Aghokeng, AF; Albert, J; Avi, R; Avila-Rios, S; Bessong, PO; Brooks, JI; Boucher, CAB; Brumme, ZL; Busch, MP; Bussmann, H; Chaix, ML; Chin, BS; Aquin, TT; Gascun, CF; Derache, A; Descamps, D; Soares, MA: Tanuri, A & et al. 2015. Geographic and Temporal Trends in the Molecular Epidemiology and Genetic Mechanisms of Transmitted HIV-1 Drug Resistance: An Individual-Patient- and Sequence-Level Meta-Analysis. PLoS Medicine (Online) 12:e1001810

Rodriguez-Marconi, S; Iglesia, RL; Diez, B; Fonseca, CA; Hajdu, EC & Trefault, N. 2015. Characterization of Bacterial, Archaeal and Eukaryote Symbionts from Antarctic Sponges Reveals a High Diversity at a Three-Domain Level and a Particular Signature for This Ecosystem. Plos One 10: e0138837.

Rosa, MR; Alves, AC; Medeiros, DV; Coni, EOC; Ferreira, CM; Ferreira, BP; Rosa, RS; Amado-Filho, GM; Pereira-Filho, GH; Moura, RL; Thompson, FL; Sumida, PYG & Francini-Filho, RB. 2015. Mesophotic reef fish assemblages of the remote St. Peter and St. Paul´s Archipelago, Mid-Atlantic Ridge, Brazil. Coral Reefs (Print) 1:1.

Rossi, MF; Dias, RJP; Senra, MVX; Martinele, I; Soares, CAG & Dagosto, M. 2015. Molecular Phylogeny of the Family Ophryscolecidae (Ciliophora, Litostomatea) Inferred from 18S rDNA Sequences. The Journal of Eukaryotic Microbiology.

Rua, CPJ; Gregoracci, GB; Soares, AC; O, ES; Francini-Filho, RB & Thompson, FL. 2015. Potential metabolic strategies of widely-distributed holobionts in the oceanic archipelago of St Peter and St Paul (Brazil). FEMS Microbiology Ecology.

Santos, EA; Quintela, AL; Ferreira, EG; Sousa, TS; Pinto, FCL; Hajdu, EC; Carvalho, MS; Salani, S; Rocha, DD; Wilke, DV; Torres, MCM; Jimenez, PC; Silveira, ER; La Clair, JJ; Pessoa, OD & Costa-Lotufo, LV. 2015. Cytotoxic Plakortides from the Brazilian Marine Sponge Plakortis angulospiculatus. Journal of Natural Products (Print) 78:996-1004.

Santos, MFC; Harper, PM; Williams, DE; Mesquita, JT; Pinto, EG; Costa-Silva, TA; Hajdu, EC; Ferreira, AG; Santos, RA; Murphy, PJ; Andersen, RJ; Tempone, AG & Berlinck, RG S. 2015. Anti-parasitic Guanidine and Pyrimidine Alkaloids from the Marine Sponge. Journal of Natural Products (Print) 78:1101-1112.

Selvatti, AP; Gonzaga, LP & Russo, CAM. 2015. A Paleogene origin for crown passerines and the diversification of the Oscines in the New World. Molecular Phylogenetics and Evolution (Print) 88:1-15.

Senra, MVX; Dias, RJP; Castelli, M; Silva-Neto, ID; Verni, F; Soares, CAG & Petroni, G. 2015. A House for Two-Double Bacterial Infection in Euplotes woodruffi Sq1 (Ciliophora, Euplotia) Sampled in Southeastern Brazil. Microbial Ecology.

Silva, AKF; Romanel, E; Silva, TF; Castilhos, Y; Schrago, CEG; Galbieri, R; Bélot, JL & Vaslin, MFS. 2015. Complete genome sequences of two new virus isolates associated with cotton blue disease resistance breaking in Brazil. Archives of Virology 160:1-4.

Silva, HAP; Nardeli, SM; Alves-Ferreira, M & Simões-Araújo, JL. 2015. Evaluation of Reference Genes for RT-qPCR Normalization in Cowpea under Drought Stress during Biological Nitrogen Fixation. Crop Science 55:10.2135.

Silva-Lima, AW; Walter, JM; Garcia, GD; Ramires, N; Ank, G; Meirelles, PM; Nobrega, AF; Silva-Neto, ID; Moura, RL; Salomon, PS; Thompson, CC & Thompson, FL. 2015. Multiple Symbiodinium Strains Are Hosted by the Brazilian Endemic Corals Mussismilia spp. Microbial Ecology 1:1.

Silveira, CB; Lima, AWS; Francini-Filho, RB; Marques, JSM; Almeida, MG; Thompson, CC; Rezende, CE; Paranhos, R; Moura, RL; Salomon, PS & Thompson, FL. 2015. Microbial and sponge loops modify fish production in phase-shifting coral reefs. Environmental Microbiology (Print) 1.

Tavares, WC; Pessôa, LM & Seuánez, HN. 2015. Plio-Pleistocene history of the endangered spiny rat Trinomys eliasi (Echimyidae) from Rio de Janeiro, Brazil. Journal of Mammalogy 96:94-106

Tavares, WC; Pessôa, LM & Seuánez, HN. 2015. Systematics and Acceleration of Cranial Evolution in Cerradomys (Rodentia, Cricetidae, Sigmodontinae) of Quaternary Sandy Plains in Southeastern Brazil. Journal of Mammalian Evolution 23:281-296.

Teixeira,LO; Amaral, SC; Finger-Jardim, F; Hora, VP; Gonçalves, CV & Soares, MA; Martinez, AMB. 2015. Frequência do Papilomavírus Humano na placenta, no colostro e no sangue do cordão umbilical. Revista Brasileira de Ginecologia e Obstetrícia 37:203-207.

Troncoso, LL; Muniz, CP; Siqueira, J; Curty, G; Schrago, CEG; Augusto, A; Fedullo, L; Soares, MA & Santos, AFA. 2015. Characterization and comparative analysis of a simian foamy virus complete genome isolated from Brazilian capuchin monkeys. Virus Research (Print) 208:1-6.

Valadão, ALC; Abreu, CM; Dias, J; Arantes, P; Verli, H; Tanuri, A & Aguiar, RS. 2015. Natural Plant Alkaloid (Emetine) Inhibits HIV-1 Replication by Interfering with Reverse Transcriptase Activity. Molecules (Basel. Online) 20:11474-11489.

Viana MC ; Menezes, AN; Moreira, MAM; Pissinatti, A & Seuánez, HN. 2015. MECP2, a gene associated with Rett syndrome in humans, shows conserved coding regions, independent Alu insertions, and a novel transcript across primate evolution. BMC Genetics (Online) 16:77.

Viana, MC; Bonvicino, CR; Jerusalinsky, L; Ferreira, JG; Langguth, A & Seuánez, HN. 2015. Understanding the relationship between Alouatta ululata and alouatta belzebul (Primates: Atelidae) based on cytogenetics and molecular phylogeny. Oecologia Australis 19:173-182.

Vidal, LEL; Santos, AFA & Soares, MA. 2015. Worldwide distribution of the NS3 gene 80K polymorphism among circulating hepatitis C genotype 1 viruses: implication for simeprevir usage. Journal of Antimicrobial Chemotherapy (Print) 1:dkv081.

Vilela, JF; Oliveira, JA & Russo, CAM. 2015. The diversification of the genus Monodelphis and the chronology of Didelphidae (Didelphimorphia). Zoological Journal of the Linnean Society 174:414-427.

Zorzatto, C; Machado, JPB; Lopes, KVG; Nascimento, KJT; Pereira, WA; Brustolini, OJB; Reis, PAB; Calil, IP; Deguchi, M; Sachetto-Martins, G; Gouveia, BC; Loriato, VAP; Silva, MAC; Silva, FF; Santos, AA; Chory, J & Fontes, EPB. 2015. NIK1-mediated translation suppression functions as a plant antiviral immunity mechanism. Nature (London) 520:679-682.

2014

Abreu, CM; Price, SL; Shirk, EN; Cunha, RD; Pianowski, LF; Clements, JE; Tanuri, A & Gama, L. 2014. Dual Role of Novel Ingenol Derivatives from Euphorbia tirucalli in HIV Replication: Inhibition of De Novo Infection and Activation of Viral LTR. Plos One 9: e97257.

Al-Saari, N; Meirelles, PM; Mino, S; Suda, W; Oshima, K; Hattori, M; Ohkuma, M; Thompson, FL; Gomez-Gil, B; Sawabe, T & Sawabe, T. 2014. Draft Genome Sequences of Two Vibrionaceae Species, Vibrio ponticus C121 and Photobacterium aphoticum C119, Isolated as Coral Reef Microbiota. Genome Announcements 2:e01095.

Alves Jr., N; Meirelles, PM; Santos, EO; Dutilh, B; Silva, GGZ; Paranhos, R; Cabral, AS; Rezende, C; Iida, T; Moura, RL; Krüger, RH; Pereira, RC; Valle, R; Sawabe, T; Thompson, CC & Thompson, FL. 2014. Microbial community diversity and physical-chemical features of the Southwestern Atlantic Ocean. Archives in Microbiology.

Amaral, GRS; Dias, GM; Wellington-Oguri, M; Chimetto, LA; Campeão, M; Vasconcelos, ATR; Thompson, CC & Thompson, FL. 2014. Genotype to phenotype: identification of diagnostic vibrio phenotypes using whole genome sequences. International Journal of Systematic and Evolutionary Microbiology (Print) 64:357-365.

Andrade, R; Cardoso, LC; Faria, PAS; Ferman, S; Achatz, MIW; Seuánez, HN & Vargas, FR. 2014. Association of TP53 polymorphisms on the risk of Wilms tumor. Pediatric Blood & Cancer 61:436-441.

Andrade, RC; Nevado, J; Lima, MAFD ; Saad, T; Moraes, L; Chimelli, Leila; Lapunzina, P; Vargas, FR. 2014. Segmental uniparental isodisomy of chromosome 6 causing transient diabetes mellitus and merosin-deficient congenital muscular dystrophy. American Journal of Medical Genetics. Part A 9.

Arenhart,RA; Bai, Y; Oliveira, LFV; Bucker Neto, L; Schunemann, M; Maraschin, FDS; Mariath, J; Silverio, A; Sachetto-Martins, G; Margis, R; Wang, ZY & Pinheiro-Margis, M. 2014. New Insights into Aluminum Tolerance in Rice: The ASR5 Protein Binds the STAR1 Promoter and Other Aluminum-Responsive Genes. Molecular Plant 7:709-721.

Ártico, S; Ribeiro-Alves, M; Oliveira-Neto, OB; Macedo, LL; Silveira, S; Grossi-de-Sá, MF; Martinelli, AP & Alves-Ferreira, M. 2014.Transcriptome analysis of Gossypium hirsutum flower buds infested by cotton boll weevil (Anthonomus grandis) larvae. BMC Genomics 15:854.

Ashton-Prolla, P & Vargas, FR. 2014. Prevalence and impact of founder mutations in hereditary breast cancer in Latin America. Genetics and Molecular Biology (Impresso) 37:234-240.

Badotti, F; Chimetto, LA; Moreira, APB, Luckwu, BT; Gomes, FCO; Krüger, RH; Thompson, CC; Morais, MA; Rosa, CA & Thompson, FL. 2014. Oenococcus alcoholitolerans sp. nov., a lactic acid bacteria isolated from cachaça and ethanol fermentation processes. Antonie van Leeuwenhoek (Gedrukt) 106:1259-1267.

Bezerra, AM; Lazar, AF; Bonvicino, CR & Cunha, A. 2014. Subsidies for a poorly known endemic semiarid biome of Brazil: non-volant mammals of an eastern region of Caatinga. Zoological Studies 53:16.

Bitner-Mathé, BC; Victorino, JS & Faria, FS. 2014. Drosophila suzukii has been found in tropical Atlantic Rainforest in southeastern Brazil.. Drosophila Information Service 97:136-137.

Bonvicino, CR; Casado, F & Weksler, M. 2014. A new species of Cerradomys (Mammalia: Rodentia: Cricetidae) from Central Brazil, with remarks on the taxonomy of the genus. Zoologia (Curitiba): an international journal for zoology 31:525-540.

Bonvicino, CR; Lazar, AF; Correa, MMO; Weksler, M; Paula, AC & Bezerra, A. 2014. Conservation units in the core are of the cerrado domain: an overview of the small nonvolant mammals (Rodentia and Didelphimorphia). Heringeriana 8:202-220.

Bonvicino, CR; Moreira, MAM & Soares, MA. 2014. Hepatitis B virus lineages in mammalian hosts: Potential for bidirectional cross-species transmission. World Journal of Gastroenterology 20: 7665-7674.

Boullosa, J; Bachu, M; Bila, D; Ranga, U; Süffert, T; Sasazawa, T & Tanuri, A. 2014.Genetic Diversity in HIV-1 Subtype C LTR from Brazil and Mozambique Generates New Transcription Factor-Binding Sites. Viruses 6:2495-2504.

Bruce, T; Leite, FG; Tschoeke, DA; Miranda, M; Pereira, N; Valle, R; Thompson, CC & Thompson, FL. 2014. Exploring the Genome of a Butyric Acid Producer, Clostridium butyricum INCQS635. Genome Announcements 2:e01169.

Cezar-de-Mello, PFT; Toledo-Pinto, TG; Marques, CS; Arnez, LEA; Cardoso, CC; Guerreiro, LTA; Antunes, SLG; Jardim, M; Covas, CJF; Illarramendi, X; Dias-Baptista, IM; Rosa, PS; Durães, SMB; Pacheco, AG; Ribeiro-Alves, M; Sarnos, EM & Moraes, MO. 2014. Pre-miR-146a (rs2910164 G>C) Single Nucleotide Polymorphism Is Genetically and Functionally Associated with Leprosy. PLoS Neglected Tropical Diseases (Online) 8:e3099.

Daloso, DM; Antunes, WC; Santana, TA; Pinheiro, DP; Ribas, RF; Sachetto-Martins, G & Loureiro, ME. 2014. Arabidopsis gun4 mutant have greater light energy transfer efficiency in photosystem II despite low chlorophyll content. Theoretical and Experimental Plant Physiology 26:177-187.

Dutilh, BE; Thompson, CC; Vicente, ACP; MAarin, MA; Lee, C; Silva, GGZ; Schmieder, R; Andrade, BGN; Chimetto, LA; Cuevas, D; Garza, DR; Okeke, IN; Aboderin, A; Spangler, J; Ross, T; Dinsdale, EA; Thompson, FL; Harkins, TT & Edwards, RA. 2014. Comparative genomics of 274 Vibrio cholerae genomes reveals mobile functions structuring three niche dimensions. BMC Genomics 15:654.

Fernandes, NM; Silva-Neto, ID & Schrago, CG. 2014. Morphology and Phylogenetic Position of an Unusual Stentor polymorphus (Ciliophora: Heterotrichea) Without Symbiotic Algae. The Journal of Eukaryotic Microbiology 61:1-10.

Fernando, SC; Wang, J; Sparling, K; Garcia, GD; Francini-Filho, RB; Moura, RL; Paranhos, R; Thompson, J & Thompson, FL. 2014. Microbiota of the Major South Atlantic Reef Building Coral Mussismilia. Microbial Ecology.

Finger-Jardim, F; Teixeira, LO; Oliveira, GR; Barral, MFM; Hora, VP; Gonçalves, CV; Soares, MA & Martinéz, AMB. 2014. Herpes simplex virus: Prevalence in placental tissue and incidence in neonatal cord blood samples. Journal of Medical Virology (Print) 86:519-524.

Gorriti, MF; Dias, GM; Chimetto, LA; Silva, AET; Silva, BS; Mesquita, MMA; Gregotacci, GB; Farias, ME; Thompson, CC & Thompson, FL. 2014. Genomic and phenotypic attributes of novel salinivibrios from stromatolites, sediment and water from a high altitude lake. BMC Genomics 15:473.

Guterres, A; Oliveira, RC; Fernandes, J; Strecht, L; Casado, F; Oliveira, FC; D´Andrea, PS; Bonvicino, CR; Schrago, CEG & Lemos, ERS. 2014. Characterization of Juquitiba Virus in Oligoryzomys fornesi from Brazilian Cerrado. Viruses 6:1473-1482.

Hait, SH; D`Arc, M; Machado, ES; Soares, EAJM; Sprinz, E & Soares, MA. 2014. Conservation of the a4ß7 lymphocyte homing receptor in HIV-infected patients with distinct transmission routes and disease progression profiles. AIDS Research and Human Retroviruses 30:140106035737003-497.

Higa, LM; Curi, BM; Aguiar, RS; Cardoso, CC; Lorenzi, AG; Sena, SF; Zingali, RB & Poian, AT. 2014. Modulation of a-Enolase Post-Translational Modifications by Dengue Virus: Increased Secretion of the Basic Isoforms in Infected Hepatic Cells. Plos One , v. 9, p. e88314, 2014.

Jiang, G; Mendes, EA; Kaiser, P; Sankaran-Walters, S; Tang, Y; Weber, MG; Melcher, GP; Thompson, GR; Tanuri, A; Pianowski, LF; Wong, JK & Dandekar, S. 2014. Reactivation of HIV latency by a newly modified Ingenol derivative via protein kinase Cd-NF-?B signaling. AIDS (London) 1-2.

Justi, SA; Russo, CAM; Mallet, JRS; Obara, MT & Galvão, C. 2014. Molecular phylogeny of Triatomini (Hemiptera: Reduviidae: Triatominae). Parasites & Vectors 7:149.

Lima-Bittencourt, CI; Costa, PS; Reis, MP; Santos, AB; Barbosa, FAR; Valentin, JL; Thompson, FL; Chartone-Souza, E & Nascimento, AMA. 2014. A survey on cultivable heterotrophic bacteria inhabiting a thermally unstratified water column in an Atlantic Rainforest lake. PeerJ 2:e478.

Lopes, LB; Guterres, A; Rozental, T; Oliveira, RC; Mares-Guia, MA; Fernandes, J; Figueredo, JF; Anschau, I; Jesus, S; Almeida, AB; Silva, VC; Via, AVGM; Bonvicino, CR; D´Andrea, P;S Barreira, JD & Lemos, ERS. 2014. Rickettsia bellii, Rickettsia amblyommii, and Laguna Negra hantavirus in an Indian reserve in the Brazilian Amazon. Parasites & Vectors 7:191.

Loss-Morais, G; Ferreira, DCR; Margis, R; Alves-Ferreira,M & Corrêa, RL. 2014. Identification of novel and conserved microRNAs in Coffea canephora and Coffea arabica. Genetics and Molecular Biology (Impresso) 37:671-682.

Loss-Oliveira, L; Calazans, LSB; Morais, EB; Mayo, SJ; Schrago, CEG & Sakuragui, CM. 2014. Floral Evolution of Philodendron Subgenus Meconostigma (Araceae). Plos One 9:e89701.

Machado, ES; Krauss, MR; Megazzini, K; Coutinho, CM; Kreitchmann, R; Melo, VH; Pilotto, JH; Ceriotto, M; Hofer, CB; Siberry, GK & Watts, DH. 2014. Hypertension, preeclampsia and eclampsia among HIV-infected pregnant women from Latin America and Caribbean countries. The Journal of Infection 1(14):S0163-4453.

Mantegazza, O; Gregis, V; Mendes, MA; Morandini, P; Alves-Ferreira, M; Patreze, CM; Nardeli, SM; Kater, MM & Colombo, L. 2014. Analysis of the arabidopsis REM gene family predicts functions during flower development. Annals of Botany (Print) 114.

Mello, BC & Schrago, CG. 2014. Assignment of Calibration Information to Deeper Phylogenetic Nodes is More Effective in Obtaining Precise and Accurate Divergence Time Estimates. Evolutionary Bioinformatics Online 10:79.

Mendonça, LM; Poeys, SC; Abreu,CM; Tanuri, A & Costa, LJ. 2014. HIV-1 Nef Inhibits Protease Activity and Its Absence Alters Protein Content of Mature Viral Particles. Plos One 9:e95352.

Moreira, APB; Chimetto, LA; Pereira, CVP; Alves Jr.,N; Francini-Filho, RB; Amado, G; Thompson, CC & Thompson, FL. 2014. Culturable Heterotrophic Bacteria Associated with Healthy and Bleached Scleractinian Madracis decactis and the Fireworm Hermodice carunculata from the Remote St. Peter and St. Paul Archipelago, Brazil. Current Microbiology (Print) 68:38-46.

Moreira, APB; Duytschaever, G; Chimetto, LA; Dias, GM; Miranda, M; Cnockaert, M; Francini-Filho, RB; Vos, P; Thompson, CC & Thompson, FL. 2014. Vibrio madracius sp. nov. Isolated from Madracis decactis (Scleractinia) in St Peter & St Paul Archipelago, Mid-Atlantic Ridge, Brazil. Current Microbiology (Print) 1.

Moreira, APB; Duytschaever, G; Chimetto, LA; Francini-Filho, RB; Vos, P; Swings, J & Thompson, FL. 2014. Photobacterium sanctipauli sp. nov. isolated from bleached Madracis decactis (Scleractinia) in the St Peter & St Paul Archipelago, Mid-Atlantic Ridge, Brazil. PeerJ 2:e427.

Moreira, JC; Cunha, ABA; Moreira, MAM; Oliveira, JA; Bonvicino, CR & Cerqueira, R. 2014. Isolation of polymorphic microsatellite loci in Akodon cursor (Cricetidae, Sigmodontinae) and cross-amplification in other akodontine rodents. Boletim da Sociedade Brasileira de Mastozoologia 71:33.

Moura-Martiniano, N; Ferreira, EM; Soares, CAG & Gazeta, GS. 2014. Rickettsia and Vector Biodiversity of Spotted Fever Focus, Atlantic Rain Forest Biome, Brazil. Emerging Infectious Diseases (Online) 20.

Muniz, CP; Soares, MA & Santos, AF. 2014. Early selection of resistance-associated mutations in HIV-1 RT C-terminal domains across different subtypes: role of the genetic barrier to resistance. Journal of Antimicrobial Chemotherapy (Print) 69:dku214.

Myburg, AA; Grattapaglia, D; Tuskan, GA; Hellsten, U; Hayes, RD; Grimwood, J; Jenkins, J; Lindquist, E; Tice, H; Bauer, D; Goodstein, DM; Dubchak, I; Poliakov, A; Mizrachi, E; Kullan, ARK; Hussey, SG; Pinard, D; Merwe, KVD; Singh, P; Jaarsveld, IV; Silva-Junior, OB; Togawa, RC; Pappas, MR; Faria, DA; Sansaloni, CP; Romanel, E; Alves-Ferreira, M & et al. 2014. The genome of Eucalyptus grandis. Nature (London) 510:13308.

Nakanishi, M; Meirelles, PM; Suzuki, R; Takatani, N; Mino, S; Suda, W; Oshima, K; Hattori, M; Ohkuma, M; Hosokawa, M; Miyashita, K; Thompson, FL; Niwa, A; Sawabe, T & Sawabe, T. 2014. Draft Genome Sequences of Marine Flavobacterium Nonlabens Strains NR17, NR24, NR27, NR32, NR33, and Ara13. Genome Announcements 2:e01165.

Oiveira, LFV; Christoff, AP; Lima, JC; Ross, B; Sachetto-Martins, G; Pinheiro-Margis, M & Margis,R. 2014. The Wall-associated Kinase gene family in rice genomes. Plant Science (Limerick) 229:181-192.

Oliveira, R; Guterres, A; Fernandes, J;D´Andrea, OS; Bonvicino, CR & Lemos, ERS. 2014. Hantavirus Reservoirs: Current Status with an Emphasis on Data from Brazil. Viruses 6:1929-1973.

Oliveira, RC; Gentile, R; Guterres, A; Fernandes, J; Valdez, FP; Teixeira, BR; Bonvicino, CR; D´Andrea, OS & Lemos, ERS. 2014. Ecological study of hantavirus infection in wild rodents in an endemic area in Brazil. Acta Tropica 131:1-10.

Pandeló, DJ; Bartholomeeusen, K; Cunha, RD; Abreu, CM; Glinski, J; Costa, TBF; Bacchi, R; Mello, AF; Pianowski Filho, LF; Dudycz, LW; Ranga, U; Peterlin, BM; Pianowski, LF; Tanuri, A & Aguiar, RS. 2014. Reactivation of latent HIV-1 by new semi-synthetic ingenol esters. Virology (New York, N.Y. Print) 462-463:328-339.

Passaes, CPB; Cardoso, CC; Caetano, DG; Teixeira, SLM; Guimaraes, ML; Campos, DP; Veloso, VG; Babic, DZ; Stevenson, M; Moraes, MO & Morgado, MG. 2014. Association of Single Nucleotide Polymorphisms in the Lens Epithelium-Derived Growth Factor (LEDGF/p75) with HIV-1 Infection Outcomes in Brazilian HIV-1+ Individuals. Plos One 9:e101780.

Poletta, FA; Orioli, IM & Castilla, EE. 2014. Genealogical data in population medical genetics: field guidelines. Genetics and Molecular Biology (Impresso) 37:171-185.

Possidonio, AC; Mesquita, MMA; Gregoracci, GB; Thompson, FL; Costa, ML & Mermelstein, C. 2014. Cholesterol depletion induces transcriptional changes during skeletal muscle differentiation. BMC Genomics 15:544.

Rua, CPJ; Silva, AET; Appolinário, LR; Venas, TM; Garcia, GD; Carvalho, L; Lima, A; Krüger, RH; Berlinck, RGS; Crespo, R; Valle, R; Thompson, CC & Thompson, FL. 2014. Diversity and antimicrobial potential of culturable heterotrophic bacteria associated with the endemic marine sponge Arenosclera brasiliensis. PeerJ 2:e419.

Sales-Marques, C; Salomão, H; Fava, VM; Alvarado-Arnez, LE; Amaral, EP; Cardos, CC; Dias-Batista, IMF; Silva, WL; Medeiros, P; Virmond, MCL; Lana, FCF; Pacheco, AGF; Moraes, MO; Mira, MT & Latini, ACP. 2014. NOD2 and CCDC122-LACC1 genes are associated with leprosy susceptibility in Brazilians. Human Genetics 2014:s00439.

Savastano, CP; Bernardi, P; Seuánez, HN; Moreira, MAM & Orioli, IM. 2014. Rare nasal cleft in a patient with holoprosencephaly due to a mutation in the ZIC2 gene. Birth Defects Research. Clinical and Molecular Teratology 300.

Savastano, CP; El-Jaick, KB; Costa-Lima, MA; Abath, CMB; Bianca, S; Cavalcanti, DP; Félix, TM; Scarano, G; Llerena Jr., JC; Vargas, FR; Moreira, MAM; Seuánez, HN; Castilla, EE & Orioli, IM. 2014. Molecular analysis of holoprosencephaly in South America. Genetics and Molecular Biology (Impresso) 37:250-262.

Schachter, J; Valadão, ALC; Aguiar, RS; Souza, VB; Rossi, AD; Arantes, P; Verli, H; Quintana, P; Heise, N; Tanuri, A; Bou-Habib, D & Persechini, P. 2014. 2´,3´-Dialdehyde of ATP, ADP, and Adenosine Inhibit HIV-1 Reverse Transcriptase and HIV-1 Replication. Current HIV Research (Print) 12:347-358.

Schrago, CEG & Voloch, CM. 2014. Performance of genomic data sets on the estimation of the divergence time of New World and Old World anthropoids. Genetics and Molecular Research 13:1425-1437.

Schrago, CEG. 2014. Estimation of the ancestral effective population sizes of African great apes under different selection regimes. Genetica (Dordrecht. Online) 142:1-7.

Schrago, CEG. 2014. The limiting distribution of the effective population size of the ancestor of humans and chimpanzees. Journal of Theoretical Biology 356:1-10.

Schrago, CEG; Menezes, AN; Furtado, CT ; Bonvicino, CR; & Seuánez, HN. 2014. Multispecies coalescent analysis of the early diversification of Neotropical primates: Phylogenetic inference under strong gene trees/species tree conflict. Genome Biology and Evolution 6:3105-3114.

Silva, MU; Americo, JA; Brindeiro, RM; Dondero, F; Prosdocimi, F & Rebelo, MF. 2014. Gene Discovery through Transcriptome Sequencing for the Invasive Mussel Limnoperna fortunei. Plos One 9:e102973.

Silva-Junior, AN; Costa, LC; Braga-Dias, LP; Oliveira, M; Rossi, AD; Cunha, RD; Gonçalves, GS & Tanuri, A. 2014. Use of the heteroduplex mobility assay and cell sorting to select genome sequences of the CCR5 gene in HEK 293T cells edited by transcription activator-like effector nucleases. Genetics and Molecular Biology (Impresso) 37:120-126.

Singh, ND; Koerich, LB; Carvalho, AB & Clark, AG. 2014. Positive and purifying selection on the Drosophila Y chromosome. Molecular Biology and Evolution 31:2612-2623.

Soares, AER & Schrago, CG. 2014. The influence of taxon sampling on Bayesian divergence time inference under scenarios of rate heterogeneity among lineages. Journal of Theoretical Biology 1-10.

Takatani N ; Meirelles, PM; Hattori, M; Thompson, FL; Hosokawa, M; Sawabe T & Sawabe, T. 2014. Draft Genome Sequence of Marine Flavobacterium Jejuia pallidilutea Strain 11shimoA1 and Pigmentation Mutants. Genome Announcements 2:e01236.

Takatani, N; Meirelles, PM; Thompson, FL; Sawabe, T & Sawabe, T. Draft Genome Sequences of Marine Flavobacterium Algibacter lectus Strains SS8 and NR4. Genome Announcements 2:e01168.

Teixeira, BR; Loureiro, N; Strecht, L; Gentile, R; Oliveira, RC; Guterres, A; Fernandes, J; Mattos, LHBV; Raboni, SM; Rubio, G; Bonvicino, CR; Santos, CND; Lemos, ERS & D´Andrea, OS. 2014. Population Ecology of Hantavirus Rodent Hosts in Southern Brazil. The American Journal of Tropical Medicine and Hygiene 13:0465.

Thompson, CC; Amaral, GR; Campeão, M; Edwards, RA; Ppolz, MF; Dutilh, BE; Ussery, DW; Sawabe, T; Swings, J & Thompson, FL. 2014. Microbial taxonomy in the post-genomic era: Rebuilding from scratch?. Archives of Microbiology.

Torquato, LS; Mattos, D; Matta, BP & Bitner-Mathé, BC. 2014. Cellular basis of morphological variation and temperature-related plasticity in Drosophila melanogaster strains with divergent wing shapes. Genetica ('s-Gravenhage) 142:495-505.

Tschoeke, DA; Moreira, APB; Tonon, LAC; Mesquita, MMA; Gregoracci, GB; Gomez-Gil; B; Thompson, CC & Thompson, FL. 2014. Exploring the Genome of Cheese Starter Lactic Acid Bacterium Lactococcus lactis subsp. lactis CECT 4433. Genome Announcements 2:e01142.

Vaz, SC; Vilela, CR; Krsticevic, FJ & Carvalho, AB. 2014. Developmental Sites of Neotropical Drosophilidae (Diptera): V. Inflorescences of Calathea cylindrica and Calathea monophylla (Zingiberales: Marantaceae). Annals of the Entomological Society of America 107:607-620.

Vidal, LEL; Santos, AFA & Soares, MA. 2014. The presence of additional resistance-related polymorphisms to NS3 protease inhibitors in hepatitis C virus sequences from the Los Alamos databank. Journal of Viral Hepatitis (Print) 21:152.

Vieira, VC; Leonardo, B; White, EA; Starrett, GJ; Temiz, NA; Lorenz, LD; Lee, D; Soares, MA; Lambert, PF; Howley, PM & Harris, RS. 2014. Human Papillomavirus E6 Triggers Upregulation of the Antiviral and Cancer Genomic DNA Deaminase APOBEC3B. mBio (Online) 5:e02234-14.

Vining, KJ; Romanel, E; Jones, RC; Klocko, A; Alves-Ferreira, M; Hefer, CA; Amarasinghe, V; Dharmawardhana, P; Naithani, S; Ranik, M; Wesley-Smith, J; Solomon, L; Jaiswal, P; Myburg, AA & Strauss, SH. 2014. The floral transcriptome of Eucalyptus grandis. New Phytologist (Print) 204.

Voloch, CM; Capellão, RT; Mello,BC & Schrago, CEG. 2014. Analysis of Adaptive Evolution in Lyssavirus Genomes Reveals Pervasive Diversifying Selection during Species Diversification. Viruses 6:4465-4478.

Weber, MLH; Hsin, HY; Kalay, E; Brozková, DS; Takehiko, S; Bayram, M; Deeley, K; Küchler, EC; Forella, J; Ruff, TD; Trombetta, VM; Sencak, RC; Hummel, M; Briseño-Ruiz, J; Revu, SK; Granjeiro, JM; Antunes, LS; Antunes, LA; Abreu, FV; Costa, MC; Tannure, PN; Koruyucu, M; Patir, A; Poletta, FA; Mereb, JC; Orioli, IM; Marazita, ML; Ouyang, H; Jayaraman, T; Seymen, F & Vieira, AR. 2014. Role of estrogen related receptor beta (ESRRB) in DFN35B hearing impairment and dental decay. BMC Medical Genetics (Online) 15:81.

2013

Aguiar, BO & Schrago, CEG. 2013. Conventional simulation of biological sequences leads to a biased assessment of multi-loci phylogenetic analysis. Evolutionary Bioinformatics Online 9:317-325.

Andrade, RC; Cardoso, LCA; Ferman, SE; Faria, PA; Seuánez, HN; Achatz, MIW & Vargas, FR. 2013. Association of TP53 polymorphisms on the risk of Wilms tumor. Pediatric Blood & Cancer 69:24038938.

Ártico, S; Lambret-Froté, J; Nardeli, SM; Oliveira-Neto, OB; Grossi-de-Sá, MF & Alves-Ferreira, M. 2013. Isolation and Characterization of Three New Promoters from Gossypium hirsutum that Show High Activity in Reproductive Tissues. Plant Molecular Biology Reporter 32:10.1007/s11105.

Balsemão- Pires, ER; Andrade, LR & Sachetto-Martins, G. 2013. Functional study of TCP23 in Arabidopsis thaliana during plant development. Plant Physiology and Biochemistry (Paris) 67:120-125.

Barbosa, RH; Aguiar, FCC; Silva, MFL; Costa, RA; Vargas, FR; Lucena, E; Ahston-Prolla, PA; Bonvicino, CR & Seuánez, HN. 2013. Screening of RB1 alterations in Brazilian patients with retinoblastoma and relatives with retinoma: phenotypic and genotypic associations. Investigative Ophthalmology & Visual Science (Online) 54:3184-3194.

Bastos, AC; Moura, RL; Amado-Filho, GM; Dagostini, DP; Secchin, NA; Francini-Filho, RB; Güth, AZ; Sumida, PYG; Mahiques, M & Thompson, FL. 2013. Buracas: Novel and unusual sinkhole-like features in the Abrolhos Bank. Continental Shelf Research.

Bezerra, AMR; Lazar, AF; Bonvicino, CR & Marinho-Filho, J. 2013. Wiedomys cerradensis Gonçalves, Almeida and Bonvicino, 2005 (Mammalia: Rodentia: Cricetidae) in Tocantins and Goiás states, central-northern Brazil.. Check List (São Paulo. Online) 9:680-683.

Bila, DCA; Young, P; Merks, H; Vubil, AS; Mahomed, M; Augusto, A; Abreu, CM; Mabunda, NJ; Brooks, JI; Tanuri, A; Jani, IV. 2013. Evolution of Primary HIV Drug Resistance in a Subtype C Dominated Epidemic in Mozambique. Plos One 8:e68213.

Bonvicino, CR; Fernandes, FA; Viana, MC; Bernardo, RT; D´Andrea, PS. 2013. Scapteromys aquaticus (Rodentia: Sigmodontinae) in Brazil with comments on karyotype and phylogenetics relationships. Zoologia (Curitiba. Impresso) 30:242-247.

Briseño-Ruiz, J; Shimizu, T; Deeley, K; Dizak, PM; Ruff, TD; Faraco, IM; Poletta, FA; Brancher, JA; Pecharki, GD; Küchler, EC; Tannure, PN; Lips, A; Vieira, TCS; Patir, A; Koruyucu, M; Mereb, JC; Resick, JM; Brandon, CA; Letra, A; Silva, RM; Cooper, M; Seymen, F; Costa, MC; Granjeiro, JM; Trevilatto, PC; Orioli,IM & et al. 2013. Role of TRAV locus in low caries experience. Human Genetics.

Britto, AMA; Amoedo, ND; Pezzuto, P; Afonso, AO; Martínez, AMB; Silveira, J; Sion, FS; Machado, ES; Soares, MA & Giannini, ALM. 2013. Expression levels of the innate response gene RIG-I and its regulators RNF125 and TRIM25 in HIV-1 infected adult and pediatric individuals. AIDS (London) 27:1879-1885.

Caramachi, FP; Junqueira, A & Bonvicino, CR. 2013. The geographic distribution of Didelphis imperfecta (Marsupialia: Didelphimorphia): an endemic species to the Guiana Shield, Eastern Amazonia. Boletim da Sociedade Brasileira de Mastozoologia 68:65-67.

Cardoso, LCA; Souza, KRL; Reis, AHO; Andrade, RC; Britto Jr., AC; Lima, MAFD; Santos, ACE; Farias, PA; Ferman, SE; Seuánez, HN & Vargas, FR. 2013. WT1, WTX and CTNNB1 mutation analysis in 43 patients with sporadic Wilms' tumor. Oncology Reports 29:315-320.

Carvalho, AB & Clark, AG. 2013. Efficient identification of Y chromosome sequences in the human and Drosophila genomes. Genome Research 23:1894-1907.

Carvalho, INSR; Reis, AHO; Cabello, PH & Vargas, FR. 2013. Polymorphisms of CDKN1A gene and risk of retinoblastoma. Carcinogenesis (New York. Online) 36:24045412.

Castilhos, RM; Furtado, G; Gheno, TC; Barsottini, O; Salarini, DZ; Vargas, FR; Lima, MAFD; Silva, LCS; Wanderley, HY; Ribeiro, E; Pereira, MLS & Jardim, LB. 2013. Spinocerebellar Ataxias in Brazil-Frequencies and Modulating Effects of Related Genes. Cerebellum (London. Print) 9.

Castilhos, RM; Souza, AFD; Furtado, GV; Gheno, TC; Silva, AL; Vargas, FR; Lima, MAFD; Barsottini, O; Pedroso, JL; Godeiro-Junior, C; Salarini, D; Pereira, ET; Lin, K; Toralles, MB; Saute, JA; Rieder, CRM; Quintas, M; Sequeiros, J; Alonso, I; Pereira, MLS & Jardim, LB. 2013. Huntington Disease And Huntington Disease-Like In A Case Series From Brazil. Clinical Genetics 86.

Castro, AP; Araújo, SD; Reis, AMM; Pompeu, M; Hatay, M; Moura, RL; Francini-Filho, RB; Thompson, FL & Krüger, RH. 2013. Bacterial communities associated with three Brazilian endemic reef corals (Mussismilia spp.) in a coastal reef of the Abrolhos shelf. Continental Shelf Research.

Cavalcanti, GS; Gregoracci, GB; Longo, LL; Bastos, AC; Ferreira, CM; Francini- Filho, RB; Paranhos, R; Ghisolfi, RD; Krüger, RH; Güth, AZ; Sumida, PYG; Bruce, T; Maia-Neto,O; Santos, EO; Iida, T; Moura, RL; Amado-Filho, GM & Thompson, FL. 2013. Sinkhole-like structures as bioproductivity hotspots in the Abrolhos Bank. Continental Shelf Research 70:126-134.

Correa, MMO; Lazar, AF; Dias, D & Bonvicino, CR. 2013. Quirópteros Hospedeiros de Zoonoses no Brasil. Boletim da Sociedade Brasileira de Mastozoologia 67: 23.

Correa, RL; Bruckner, F; Cascardo, RS & Alfenas-Zerbini, P. 2013. The Role of F-Box Proteins during Viral Infection. International Journal of Molecular Sciences (Online) 14:4030-4049.

Costa, ECB; Amorim, R; Silva, FC; Rocha, DR; Papa, MP; Arruda, LB; Mohana-Borges, R; Ferreira, VF; Tanuri, A; Costa, LJ & Ferreira, SB. 2013. Synthetic 1,4-Pyran Naphthoquinones Are Potent Inhibitors of Dengue Virus Replication. Plos One 8:e82504.

Costa, TP; Leal, MC; Mota, JC; Machado, ES; Costa, E; Vianna, P; Oiveira, RH; Abreu, TF; Nogueira, SA & Hofer, CB. 2013. Comparison of pregnancy characteristics and outcomes between HIV-infected and HIV-non-infected women in Brazil. Aids Care (Print) 1:1-5.

Costa-Lima, MA; Amorim, MR & Orioli, IM. 2013. Association of methylenetetrahydrofolate reductase gene 677C > T polymorphism and Down syndrome. Molecular Biology Reports 40:2115-2125.

Covas, CJF; Cardoso, CC; Silva, AG; Oliveira, J; Cruz, AM & Moraes, MO. 2013. Candidate gene case-control and functional study shows macrophage inhibitory factor (MIF) polymorphism is associated with cutaneous leishmaniasis. Cytokine 61:168-172.

Delviks-Frankenberry, KA; Lengruber, RB; Santos, AFA; Silveira, JM; Soares, MA; Kearney, MF; Maldarelli, F & Pathak, VK. 2013. Connection subdomain mutations in HIV-1 subtype-C treatment-experienced patients enhance NRTI and NNRTI drug resistance. Virology (New York, N.Y. Print) 435:433-441.

Elshahawi, SI; Silva, AET; Hanora, A; Han, AW; Flores, MS; Vizzoni, VF; Schrago, CEG; Soares, CAG; Concepcion, GP; Distel, DL; Schmidt, EW & Haygood, MG. 2013. PNAS Plus: Boronated tartrolon antibiotic produced by symbiotic cellulose-degrading bacteria in shipworm gills. Proceedings of the National Academy of Sciences of the United States of America 111:1-10.

Faria, MB; Nascimento, FF; Oliveira, JA & Bonvicino, CR. 2013.Biogeographic Determinants of Genetic Diversification in the Mouse Opossum Gracilinanus agilis (Didelphimorphia: Didelphidae). Journal of Heredity 104:613-626.

Faria, MB; Oliveira, JA & Bonvicino, CR. 2013. Filogeografia de populações brasileiras de Marmosa (Marmosa) murina (Didelphimorphia, Didelphidae). Revista Nordestina de Biologia 21:27-52.

Fernandes, LR; Costa, ECB; Vargas, FR & Moreira, MAM. 2013. Influence of estrogen and variations at the BRCA1 promoter region on transcription and translation. Molecular Biology Reports 9:9.

Fernandes, NM; Dias, RJP; Senra, MVX; Soares, CAG & Silva-Neto, ID. 2013. Morphology and 18S rDNA gene sequence of Blepharisma sinuosum Sawaya, 1940 (Ciliophora: Heterotrichea) from Brazil. European Journal of Protistology (Print).

Fonjungo, P; Girma, M; Melaku, Z; Mekonen, T; Tanuri, A; Hailegiorgis, B; Tegbaru, B; Mengistu, Y; Ashenafi, A; Mamo, W; Abreha, T; Tibesso, G; Ramos, A; Ayana, G; Freeman, R; Nkengasong, JN; Zewdu, S; Kebede, Y; Abebe, A; Kenyon, TA & Messele, T. Field expansion of DNA polymerase chain reaction for early infant diagnosis of HIV-1: The Ethiopian experience. African Journal of Laboratory Medicine 2:1-7.

Garcia, GD; Gregoracci, GB; Santos, EO; Meirelles, PM; Silva, GGZ; Edwards, R; Sawabe, T; Gotoh, K; Nakamura, S; Iida, T; Moura, RL & Thompson, FL. 2013. Metagenomic Analysis of Healthy and White Plague-Affected Mussismilia braziliensis Corals. Microbial Ecology 65:1076-1086.

Gregg, A; Haas, A; Hatay, M; Barott, K; Vermeij, M; Marhaver, K; Meirelles, PM; Thompson, FL & Rohwer, F. 2013. Biological oxygen demand optode analysis of coral reef-associated microbial communities exposed to algal exudates. PeerJ 1:e107.

Guterres, A; Oliveira, RC; Fernandes, J; D´Andrea, PS; Bonvicino, CR; Bragagnolo, C; Guimarães, GD; Almada, GL; Machado, RR; Lavocat, M; Elkhoury, MR; Schrago, CEG & Lemos, ERS. 2013. Phylogenetic Analysis of the S segment from Juquitiba hantavirus: Identification of two distinct lineages in Oligoryzomys nigripes. Infection, Genetics and Evolution (Print) 18: 01-10.

Han, AW; Sandy, M; Fishman, B; Silva, AET; Soares, CAG; Distel, D; Butler, A & Haygood, MG. 2013. Turnerbactin, a Novel Triscatecholate Siderophore from the Shipworm Endosymbiont Teredinibacter turnerae T7901. Plos One 8:e76151.

Hoffmann, L; Ranos, JA; Souza, EV; Ramos, ALA; Villela-Nogueira, CA; Ürményi, TP; Tanuri, A; Rondinelli, E & Silva, R. 2013. Dynamics of resistance mutations to NS3 protease inhibitors in a cohort of Brazilian patients chronically infected with hepatitis C virus (genotype 1) treated with pegylated interferon and ribavirin: a prospective longitudinal study. Virology Journal 10:57.

Homma,A; Tanuri, A; Duarte, AJS; Marques, E; Almeida, A; Martins, R; Silva-Junior, JB & Possas, C. 2013. Vaccine research, development, and innovation in Brazil: A translational science perspective. Vaccine (Guildford) 31:B54-B60.

Ismael, N; Ramalho, D; Mariani, D; Vubil, A; Mabunda, N; Abreu, CM; Jani, I & Tanuri, A. 2013. Genetic Analysis and Natural Polymorphisms in HIV-1 gp41 isolates from Maputo city, Mozambique. AIDS Research and Human Retroviruses 131104222652003.

Klautau, MRL; Azevedo, F; Condor-Lujan, B; Rapp, HT; Collins, A & Russo, CAM. 2013. A Molecular Phylogeny for the Order Clathrinida Rekindles and Refines Haeckel's Taxonomic Proposal for Calcareous Sponges. Integrative and Comparative Biology 53:447-461.

Küchler, EC; Deeley, K; Ho, B; Linkowski, S; Meyer, C; Noel, J; Kouzbari, MZ; Bezamat, M; Granjeiro, JM; Antunes, LS; Antunes, LA; Abreu, FV; Costa, MC; Tannure, PN; Seymen, F; Koruyucu, M; Patir, A; Mereb, JC; Poletta, FA; Castilla, EE; Orioli, IM; Marazita, ML & Vieira, AR. 2013. Genetic mapping of high caries experience on human chromosome 13. BMC Medical Genetics (Online) 14:116.

Lampe, E; Lewis-Ximenez, L; Espírito-Santo, MP; Delvaux, NM; Pereira, SA; Peres-da-Silva, A; Martins, RMB ; Soares, MA; Santos, AFA; Vidal, LEL; Germano, FN; Martinez, AMB; Basso, R; Pinho, JRR; Malta, FM; Gouvêa, MG; Moliterno, RA; Bertolini, DA; Fujishima, MAT; Bello, Gonzalo. 2013. Genetic diversity of HCV in Brazil. Antiviral Therapy (London) 18:435-444.

Lima, EJ; Queiroz, M; Costa, FF; Coutinho, MP; Higino, K; Llerena Jr., JC; Vargas, FR; Santos, SR; Geller, M & Ribeiro, MG. 2013. Clinical characteristics of alopecia areata in Down syndrome. Acta Dermatovenerologica Croatica 21:253-258.

Loretto, D; Weksler, M; Lazar,A; Percequillo,A; Bonvicino, CR; Cordeiro, JLP; Bezerra, A; Carmignotto, AP; Delciellos, AC; Testoni, A; Grelle, CE; Astúa, D; Setz, E; Vieira, E; Melo, F; Prevedello, J; Marinho, J; Voltolini, J; Kajin, M; Ferreira, M; Alvarez, M; Alvarez, M; Dalloz, M; Graipel, M; Aragona, M; Périssé, M & et al. 2013. On the practice of toe clipping for small mammal studies in Brazil (Copyright 2013, published March 2014). Boletim da Sociedade Brasileira de Mastozoologia 66:12-14.

Machado, CR; Machado, ES; Rohloff, RD; Azevedo, M; Campos, DP; Oliveira, RB & Brasil, P. 2013. Is Pregnancy Associated with Severe Dengue? A Review of Data from the Rio de Janeiro Surveillance Information System. PLoS Neglected Tropical Diseases (Online) 7:e2217.

Marques, CS; Brito-de-Souza, VN; Guerreiro, LTA; Martins, JH; Amaral, EP; Cardoso, CC; Dias-Baptista, IM; Silva, WL; Nery, JAC; Medeiros, P; Gigliotti, P; Campanelli, AP; Virmond, M; Sarno, EM; Mira, MT; Lana, FCF; Caffarena, ER; Pacheco, AG; Pereira, AC & Moraes, MO. 2013. Toll-like Receptor 1 N248S Single-Nucleotide Polymorphism Is Associated With Leprosy Risk and Regulates Immune Activation During Mycobacterial Infection. The Journal of Infectious Diseases 208:120-129.

Menezes, AN; Viana, MC; Furtado, C; Schrago, CEG & Seuánez, HN. 2013. Positive Selection along the evolution of Primate Mitogenomes. Mitochondrion (Amsterdam. Print) 13:01-10

Menezes, BF; Vigoder, FM; Peixoto, AA; Varaldi, J & Bitner-Mathé, BC. 2013. The influence of male wing shape on mating success in Drosophila melanogaster. Animal Behaviour 85:2117-2123.

Menezes-Costa, A; Ferreira, EM; Voloch, CM; Bonvicino, CR; Seuánez, HN; Leoncini, O & Soares, CAG. 2013. Identification of Bacterial Infection in Neotropical Primates. Microbial Ecology 66:471-478.

Meyrelles, ARI ; Siqueira, JD; Hofer, CB; Costa, TP; Azevedo, AP; Guimarães, BV; Seuánez, HN; Soares, MA; Almeida, G; Soares, EAJM & Machado, ES. 2013. HIV/HPV co-infection during pregnancy in southeastern Brazil: prevalence, HPV types, cytological abnormalities and risk factors. Gynecologic Oncology (Print) 128:107-112.

Moura, RL; Secchin, NA; Amado-Filho, GM; Francini-Filho, RB; Freitas, MO; Minte-Vera, CV; Teixeira, JB; Thompson, FL; Dutra, GF; Sumida, PYG; Guth, AZ; Lopes, RM & Bastos, AC. 2013. Spatial patterns of benthic megahabitats and conservation planning in the Abrolhos Bank. Continental Shelf Research.

Muniz, CP; Troncoso, LL; Moreira, MAM; Soares, EAJM; Pissinatti, A; Bonvicino, CR; Seuánez, HN; Sharma, B; Jia, H; Shankar, A; Switzer, WM; Santos, AFA & Soares, MA. 2013. Identification and Characterization of Highly Divergent Simian Foamy Viruses in a Wide Range of New World Primates from Brazil. Plos One 8:e67568.

Nascimento, FF; Lazar, AF; Menezes, NA; Durans, AM; Moreira, JC; Salazar-Bravo, J; D´Andrea, PS & Bonvicino, CR. 2013. The Role of Historical Barriers in the Diversification Processes in Open Vegetation Formations during the Miocene/Pliocene Using an Ancient Rodent Lineage as a Model. Plos One 8:e61924.

Oliveira, GR; Vieira, VC; Barral, MFM; Döwich, V; Soares, MA; Gonçalves , CV & Martinez, AMB. 2013. Fatores de risco e prevalência da infecção pelo HPV em pacientes de Unidades Básicas de Saúde e de um Hospital Universitário do Sul do Brasil. Revista Brasileira de Ginecologia e Obstetrícia (Impresso) 35: 226-232.

Prellwitz, IM; Alves, BLM; Ikeda, ML; Kuhleis, D; Picon, P; Jarczewski, CA; Osório, MR; Sanchez, A; Seuánez, HN; Larouze, B; Soares, MA & Soares, EAJM. 2013. HIV behind Bars: Human Immunodeficiency Virus Cluster Analysis and Drug Resistance in a Reference Correctional Unit from Southern Brazil. Plos One 8:e69033.

Reis, VM; Oliveira, LS; Passos, RF; Viana, NB; Mermelstein, C; Sant´Anna, C; Pereira, RC; Paradas, WC; Thompson, FL; Amado-Filho, GM & Salgado, LT. 2013. Traffic of Secondary Metabolites to Cell Surface in the Red Alga Laurencia dendroidea Depends on a Two-Step Transport by the Cytoskeleton. Plos One 8:e63929.

Russo, CAM; Mello, BC; Frazão,A & Voloch, CM. 2013. Phylogenetic analysis and a time tree for a large drosophilid data set (Diptera: Drosophilidae). Zoological Journal of the Linnean Society.

Sawabe, T; Ogura, Y; Matsumura, Y; Gao, F; Amin, AR; Mino, S; Nakagawa, S; Sawabe, T; Kumar, R; Fukui, Y; Satomi, M; Matsushima, R; Thompson, FL; Gomez-Gil, B; Christen, R; Maruyama, F; Kurokawa, K & Hayashi, T. 2013. Updating the Vibrio clades defined by multilocus sequence phylogeny: proposal of eight new clades, and the description of Vibrio tritonius sp. nov.. Frontiers in Microbiology (Online) 4:1-14.

Schrago, CEG & Voloch, CM . 2013. The precision of the hominid timescale estimated by relaxed clock methods. Journal of Evolutionary Biology (Printed ed.) 26:746-755.

Schrago, CEG. 2013. The effective population sizes of the anthropoid ancestors of the human-chimpanzee lineage provide insights on the historical biogeography of the great apes. Molecular Biology and Evolution 31:37-47.

Schrago, CEG; Mello,BC & Soares, AER. 2013. Combining fossil and molecular data to date the diversification of New World Primates. Journal of Evolutionary Biology (Printed ed.) 26:1-9.

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